ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 27.2.1

Subclass Accession number: 5183
Subclass: 27.2.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
GO : GO:0004096 (>75 %) GO:0004601 (>75 %) GO:0016684 (>75 %)
SCOP : 48112 (>75 %) 48113 (>75 %) 74753 (>75 %)

Number of loops: 2

Average sequence ID (%) : 73.3 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 90-135

rho (°): 180-225

Consensus Sequence:	SThRcSDKRGGANGARhRLXPQKcWEhNpPE
(φψ)-conformation:	aapbaaalpeeapglaaabpwaaapaaalaa

Pattern:	x	[V]	[S]	[Q]	[L]	[V]	[KS]	[T]	[A]	[W]	[A]	[AS]	[A]	[S]	[T]	[FY]	[R]	[DG]	[S]	[D]	[K]	[R]	[G]	[G]	[A]	[N]	[G]	[A]	[R]	[IL]	[R]	[L]	[AE]	[P]	[Q]	[K]	[DN]	[W]	[E]	[AV]	[N]	[EQ]	[P]	[E]	[Q]	[L]	[AE]	[AT]	[V]	[L]	[EG]	[T]	[L]	[E]	[AN]	[I]	[QR]	[T]	[AE]	[F]
Conservation:	-1.000	-0.259	-0.259	0.292	-0.259	-0.259	-1.223	0.292	-0.259	3.597	-0.259	-1.085	-0.259	-0.259	0.292	0.154	0.292	-1.085	-0.259	0.843	0.292	0.292	0.843	0.843	-0.259	0.843	0.843	-0.259	0.292	-0.810	0.292	-0.259	-1.499	1.393	0.292	0.292	-0.535	3.597	0.292	-1.361	0.843	-0.535	1.393	0.292	0.292	-0.259	-1.499	-1.223	-0.259	-0.259	-1.499	0.292	-0.259	0.292	-1.636	-0.259	-0.810	0.292	-1.499	0.843

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1itk_A_460	1itk	A	461	519	.VSQLVKTAWASASTYRDSDKRGGANGARLRLEPQKNWEVNEPEQLETVLGTLENIQTEF	.HHHHHHHHHHHHTT-BTTTTB--STB-GGGSTTGGG-GGG-HHHHHHHHHHHHHHHHHH	.aaaaaaaaaaaaaaxbaaalxeeaxglaaabxwaaaxaaalaaaaaaaaaaaaaaaaaa
1mwv_A_477	1mwv	A	478	536	.VSQLVSTAWAAASTFRGSDKRGGANGARIRLAPQKDWEANQPEQLAAVLETLEAIRTAF	.HHHHHHHHHHHHTT-BTTTTB-SSTB-GGGSTTGGG-GGG-HHHHHHHHHHHHHHHHHH	.aaaaaaaaaaaaaaxbaaalxeeaxglaaabxwaaaxaaalaaaaaaaaaaaaaaaaaa

Clusters included in this Subclass