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Information on SUBCLASS 35.1.1
Subclass Accession number: 5186
Subclass: 35.1.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.8 (>50 %)  2.8 (>75 %)  2.8.2 (>50 %)  2.8.2 (>75 %)  2.8.2.4
GO : GO:0004304 (>50 %)  GO:0005496 (>50 %)  GO:0008146 (>75 %)  GO:0008146 (>75 %)  GO:0016782 (>75 %)  GO:0016782 (>75 %)  
SCOP : 52539 (>75 %)  52539 (>75 %)  52540 (>75 %)  52540 (>75 %)  52575 (>75 %)  52575 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 54.9 +/- -0.3
Average RMSD (Å) : 0.433 +/- 0.058

Consensus geometry
d (Å): 31 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: KXNXXpNYTXhPXphhcppXXhFhRKGhXGDWKppFTVA
(φψ)-conformation: aapaaaalaappaaabpaaabpapaalbbgaaaaappaa
Pattern: x[F][KQS][AE][M][K][AKN][N][PT]x[ST][N][Y][T][LT][LV][P][DPQ][ES][FIL][LM][DN][HQ][KRS]x[GS][AP][F][LM][R][K][G][IMV][ACT][G][D][W][K][NT][HT][F][T][V][A]x[NS][E][AKR][F][D][AKR]x[Y][AER]
Conservation:-1.0001.012-0.974-0.9190.5420.542-1.3401.012-0.520-0.891-0.4601.0121.4830.542-0.919-0.6051.483-1.079-0.689-0.870-0.230-0.118-0.083-0.974-1.445-0.679-0.6041.012-0.2300.5420.5421.012-0.608-0.9741.0121.0123.3640.542-0.416-0.5261.0120.5420.0710.071-1.117-0.3020.542-1.0791.0121.012-1.079-1.3921.483-1.288
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1g3m_A_2281g3m   A229281.FQEMKNNPSTNYTTLPDEIMNQKLSPFMRKGITGDWKNHFTVALNEKFDKHYE.HHHHHH-TTTS-TTS-TTTB-TTTS-SS----S-GGGGTS-HHHHHHHHHHHH.aaaaaaxaaaaUaaxxaaabxaaabxaxaavbbgaaaaaxxaaaaaaaaaaaa
1ls6_A_2291ls6   A230282.FKEMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVAQNERFDADYA.HHHHHH-TTTS-TTS-TTTB-TTT--SS----SSGGGGTS-HHHHHHHHHHHH.aaaaaaxaaaavaaxpabNbbaaabxaxaavbbvaaaaaxxaaaaaaaaaaaa
1q20_A_2461q20   A247299.FSAMKANTMSNYTLLPPSLLDHRRGAFLRKGVCGDWKNHFTVAQSEAFDRAYR.HHHHHT-TTTS-TTS-TTTB-TTT--SS----S-GGGGT--HHHHHHHHHHHH.aaaaaaxaaaavaaxwaaabxaaabbaxaavbbvaaaaOxxaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 228
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE Q - 229
1g3m_A_2281g3m   A     EDO1,2-ETHANEDIOL Q - 229
1g3m_A_2281g3m   A     EDO1,2-ETHANEDIOL E - 230
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 231
1g3m_A_2281g3m   A     EDO1,2-ETHANEDIOL N - 233
1g3m_A_2281g3m   A     EDO1,2-ETHANEDIOL N - 234
1g3m_A_2281g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL Y - 239
1g3m_A_2281g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL I - 246
1g3m_A_2281g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL M - 247
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE P - 253
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 254
1g3m_A_2281g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL F - 254
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 255
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE R - 256
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 257
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE G - 258
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE I - 259
1g3m_A_2281g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE D - 262
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 229
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 230
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 232
1ls6_A_2291ls6   A     NPOP-NITROPHENOL Y - 240
1ls6_A_2291ls6   A     NPOP-NITROPHENOL V - 243
1ls6_A_2291ls6   A     NPOP-NITROPHENOL P - 244
1ls6_A_2291ls6   A     NPOP-NITROPHENOL F - 247
1ls6_A_2291ls6   A     NPOP-NITROPHENOL M - 248
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE P - 254
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 255
1ls6_A_2291ls6   A     NPOP-NITROPHENOL F - 255
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 256
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE R - 257
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 258
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE G - 259
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 260
1ls6_A_2291ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE D - 263
1q20_A_2461q20   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 246
1q20_A_2461q20   A     A3PADENOSINE-3'-5'-DIPHOSPHATE S - 247
1q20_A_2461q20   A     A3PADENOSINE-3'-5'-DIPHOSPHATE M - 249
1q20_A_2461q20   A     PLO(3BETA)-3-HYDROXYPREGN-5-EN-20-ONE Y - 257
1q20_A_2461q20   A     PLO(3BETA)-3-HYDROXYPREGN-5-EN-20-ONE L - 260
1q20_A_2461q20   A     PLO(3BETA)-3-HYDROXYPREGN-5-EN-20-ONE L - 264
1q20_A_2461q20   A     A3PADENOSINE-3'-5'-DIPHOSPHATE F - 272
1q20_A_2461q20   A     PLO(3BETA)-3-HYDROXYPREGN-5-EN-20-ONE F - 272
1q20_A_2461q20   A     A3PADENOSINE-3'-5'-DIPHOSPHATE L - 273
1q20_A_2461q20   A     A3PADENOSINE-3'-5'-DIPHOSPHATE R - 274
1q20_A_2461q20   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 275
1q20_A_2461q20   A     A3PADENOSINE-3'-5'-DIPHOSPHATE G - 276
1q20_A_2461q20   A     A3PADENOSINE-3'-5'-DIPHOSPHATE V - 277
1q20_A_2461q20   A     A3PADENOSINE-3'-5'-DIPHOSPHATE D - 280

Clusters included in this Subclass
CLUSTER: HH.35.1