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PDB code:

Information on SUBCLASS 0.1.3

Subclass Accession number: 5190 Subclass: 0.1.3 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 36 Average sequence ID (%) : 9.4 +/- 13.3 Average RMSD (Å) : 0.494 +/- 0.171 Consensus geometry d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ac5_*_388	1ac5	-	393	400	DTIDNLKW	HHHHH-EE	aaaaaxbb
1b37_A_284	1b37	A	288	295	RAIYQFDM	HHHHHSEE	aaaaaxbb
1bxk_A_121	1bxk	A	122	129	DKKSAFRF	HHHHH-EE	aaaaaxbb
1cb6_A_1335	1cb6	A	1339	1346	AARRARVV	HHHHHSEE	aaaaaxbx
1cq3_A_114	1cq3	A	119	126	SMIKDCEM	HHHHH-EE	aaaaapbb
1dmt_A_462	1dmt	A	470	477	EKALAIKE	HHHHH-EE	aaaaapxx
1dof_A_306	1dof	A	329	336	RVLKNVYI	HHHHH-EE	aaaaaxxx
1ffv_B_123	1ffv	B	128	135	DAVEAVKV	HHHHH-EE	aaaaaxxb
1g2q_A_2	1g2q	A	9	16	ELKLALHQ	HHHHH-EE	aaaaaxbx
1g3s_A_215	1g3s	A	216	223	DLAHTIRI	HHHHH-EE	aaaaaxxb
1gz3_A_334	1gz3	A	336	343	EAQKKIWM	HHHHTEEE	aaaaabbb
1h54_A_452	1h54	A	463	470	FWADRVHF	HHHHH-EE	aaaaaxbx
1ile_*_412	1ile	-	417	424	RNNQEIHW	HHHHHSEE	aaaaapxx
1iq0_A_525	1iq0	A	540	547	NAYYNARE	HHHHH-EE	aaaaapbb
1iuq_A_157	1iuq	A	158	165	YIAENTIF	HHHHH-EE	aaaaapbx
1ji6_A_559	1ji6	A	559	566	SAALLQRY	HHHHS-EE	aaaaaxbb
1jkg_B_448	1jkg	B	450	457	LRFRLLKH	HHHHHSEE	aaaaaxxb
1ju2_A_443	1ju2	A	449	456	FCRESVAS	HHHHH-EE	aaaaapbx
1jw9_B_22	1jw9	B	27	34	EALKDSRV	HHHHH-EE	aaaaaxbb
1k7w_A_330	1k7w	A	350	357	GVISTLQI	HHHHH-EE	aaaaaxbx
1k8k_A_388	1k8k	A	389	396	EFYQVCHT	HHHHHSEE	aaaaaxxx
1kew_A_120	1kew	A	121	128	DKKNNFRF	HHHHH-EE	aaaaapbb
1m8z_A_1091	1m8z	A	1099	1106	DEVCTMND	HHHHH-EE	aaaaaxbb
1mh3_A_91	1mh3	A	93	99	TWDAVRY.	HHHHTEE.	aaaaabb.
1mzv_A_18	1mzv	A	22	29	LLKKNYRW	HHHHH-EE	aaaaaxbb
1n62_B_126	1n62	B	131	138	DAIELVEV	HHHHH-EE	aaaaaxbb
1oe9_B_57	1oe9	B	58	65	DELKSRRV	HHHHH-EE	aaaaaxbb
1p42_A_109	1p42	A	114	121	AIRKNILN	HHHTTEEE	aaaaaxbx
1q3q_A_121	1q3q	A	138	145	ILDEIAIR	HHHHH-EE	aaaaapxx
1q3q_A_171	1q3q	A	181	188	AVKQVAEK	HHHHH-EE	aaaaaxbx
1q5n_A_320	1q5n	A	344	351	DVLKGMEV	HHHHH-EE	aaaaapbx
1qks_A_464	1qks	A	464	471	AEISGSVA	HHHHT-EE	aaaaabbx
1r42_A_110	1r42	A	125	132	TIYSTGKV	HHHHH-EE	aaaaaxbb
1reo_A_296	1reo	A	297	304	RATRRIKF	HHHHTSEE	aaaaaxxb
1sbp_*_152	1sbp	-	161	168	ALFKNVEV	HHHHTEEE	aaaaaxab
1ycq_A_92	1ycq	A	98	105	MISRNLVS	HHHTTEEE	aaaaabab

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ac5_*_388	1ac5	*	NAGN-ACETYL-D-GLUCOSAMINE	W - 400
1bxk_A_121	1bxk	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	I - 132
1bxk_A_121	1bxk	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	S - 133
1bxk_A_121	1bxk	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	T - 134
1gz3_A_334	1gz3	A	ATPADENOSINE-5'-TRIPHOSPHATE	F - 344
1gz3_A_334	1gz3	A	ATPADENOSINE-5'-TRIPHOSPHATE	D - 345
1iuq_A_157	1iuq	A	MSESELENOMETHIONINE	V - 166
1k7w_A_330	1k7w	A	AS1ARGININOSUCCINATE	D - 330
1k7w_A_330	1k7w	A	AS1ARGININOSUCCINATE	K - 331
1kew_A_120	1kew	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	I - 131
1kew_A_120	1kew	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	S - 132
1kew_A_120	1kew	A	TYDTHYMIDINE-5'- DIPHOSPHATE	T - 133
1kew_A_120	1kew	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	T - 133
1reo_A_296	1reo	A	FADFLAVIN-ADENINE DINUCLEOTIDE	A - 298
1reo_A_296	1reo	A	FADFLAVIN-ADENINE DINUCLEOTIDE	I - 302

Clusters included in this Subclass

CLUSTER: HE.0.4

CLUSTER: HE.1.7

CLUSTER: HE.2.15

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