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Information on SUBCLASS 0.1.6
Subclass Accession number: 5193
Subclass: 0.1.6 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 28

Average sequence ID (%) : 8.3 +/- 14.5
Average RMSD (Å) : 0.543 +/- 0.155

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: pXXX
(φψ)-conformation: aabb
Pattern: xx[dehknrstw]xx[acfiklmtv]
Conservation:-1.7200.0861.0700.780-0.4660.250
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aoh_A_651aoh   A6570PTKSFDHHHHEEaaaabb
1b63_A_2181b63   A220225FLEQALHHHHEEaaaaxb
1chm_A_3961chm   A396401PEKNIIHHHHEEaaaaxx
1g62_A_1041g62   A104109LGNVICHHHHEEaaaabb
1g66_A_1191g66   A121126AVNMVKHHHHEEaaaaxa
1gpe_A_4841gpe   A484489MKEYFAHHHHEEaaaaxa
1gzd_A_351gzd   A3641FNHFSLHHHSEEaaaabb
1iat_A_2381iat   A238243VAKHFVHHHHEEaaaabb
1iat_A_351iat   A3641FNHFSLHHHTEEaaaabb
1ih7_A_7881ih7   A788793IAKYDVHHHHEEaaaaxb
1jj7_A_5741jj7   A577582LHRQVAHHHHEEaaaabb
1l9x_A_1841l9x   A186191LKKFFNHHHHEEaaaabx
1lf6_A_5501lf6   A560565DSTIKVHHHSEEaaaabb
1mf7_A_2921mf7   A292297PRDHVFHHHHEEaaaabb
1mjn_A_2821mjn   A282287ASEFVKHHHHEEaaaabb
1mz4_A_51mz4   A510PEVLTVHHHHEEaaaaxb
1nnf_A_1551nnf   A165170LKENGKHHHHEEaaaaxb
1o4y_A_1611o4y   A162167WFAQRMHHHTEEaaaabb
1onc_*_31onc   -712QKKHITHHHHEEaaaabb
1qdm_A_2791qdm   A279284PEEYILHHHHEEaaaabb
1qoz_A_1191qoz   A121126AVSAVKHHHHEEaaaaxa
1rvx_A_1021rvx   A108113QLSSVSHHTTEEaaaaba
1ug9_A_4771ug9   A478483EKWMFTHHHHEEaaaaxx
1umz_A_2341umz   A244249RQKYTIHHHTEEaaaaxa
1uwc_A_2451uwc   A245250DAHTTYHHHHEEaaaabb
1vk4_A_1411vk4   A141146QGFVRVHHHHEEaaaaxb
2up1_A_112up1   A1116EQLRKLHHHHEEaaaabb
3gcb_*_4083gcb   -411416FEEYCFHHHHEEaaaaba
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE F - 488
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE A - 489
1gpe_A_4841gpe   A     NAGN-ACETYL-D-GLUCOSAMINE G - 490
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE G - 490
1gpe_A_4841gpe   A     NAGN-ACETYL-D-GLUCOSAMINE E - 491
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE E - 491
1gpe_A_4841gpe   A     NAGN-ACETYL-D-GLUCOSAMINE T - 492
1gpe_A_4841gpe   A     MANALPHA-D-MANNOSE T - 492
1gpe_A_4841gpe   A     NAGN-ACETYL-D-GLUCOSAMINE L - 493
1mz4_A_51mz4   A     GOLGLYCEROL P - 11
1umz_A_2341umz   A     XYSXYLOPYRANOSE K - 246
1umz_A_2341umz   A     NAGN-ACETYL-D-GLUCOSAMINE I - 249
1umz_A_2341umz   A     XYSXYLOPYRANOSE Y - 250
1uwc_A_2451uwc   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID H - 247
3gcb_*_4083gcb   *     GOLGLYCEROL V - 419
3gcb_*_4083gcb   *     GOLGLYCEROL V - 420
3gcb_*_4083gcb   *     GOLGLYCEROL D - 421

Clusters included in this Subclass
CLUSTER: HE.0.5
CLUSTER: HE.1.13