Information on SUBCLASS 0.1.6 |
Subclass Accession number: 5193
Subclass: 0.1.6 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 28 Average sequence ID (%) : 8.3 +/- 14.5 Average RMSD (Å) : 0.543 +/- 0.155 Consensus geometry
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Consensus Sequence: | pXXX |
(φψ)-conformation: | aabb |
Pattern: | x | x | [dehknrstw] | x | x | [acfiklmtv] |
Conservation: | -1.720 | 0.086 | 1.070 | 0.780 | -0.466 | 0.250 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aoh_A_65 | 1aoh | A | 65 | 70 | PTKSFD | HHHHEE | aaaabb |
1b63_A_218 | 1b63 | A | 220 | 225 | FLEQAL | HHHHEE | aaaaxb |
1chm_A_396 | 1chm | A | 396 | 401 | PEKNII | HHHHEE | aaaaxx |
1g62_A_104 | 1g62 | A | 104 | 109 | LGNVIC | HHHHEE | aaaabb |
1g66_A_119 | 1g66 | A | 121 | 126 | AVNMVK | HHHHEE | aaaaxa |
1gpe_A_484 | 1gpe | A | 484 | 489 | MKEYFA | HHHHEE | aaaaxa |
1gzd_A_35 | 1gzd | A | 36 | 41 | FNHFSL | HHHSEE | aaaabb |
1iat_A_238 | 1iat | A | 238 | 243 | VAKHFV | HHHHEE | aaaabb |
1iat_A_35 | 1iat | A | 36 | 41 | FNHFSL | HHHTEE | aaaabb |
1ih7_A_788 | 1ih7 | A | 788 | 793 | IAKYDV | HHHHEE | aaaaxb |
1jj7_A_574 | 1jj7 | A | 577 | 582 | LHRQVA | HHHHEE | aaaabb |
1l9x_A_184 | 1l9x | A | 186 | 191 | LKKFFN | HHHHEE | aaaabx |
1lf6_A_550 | 1lf6 | A | 560 | 565 | DSTIKV | HHHSEE | aaaabb |
1mf7_A_292 | 1mf7 | A | 292 | 297 | PRDHVF | HHHHEE | aaaabb |
1mjn_A_282 | 1mjn | A | 282 | 287 | ASEFVK | HHHHEE | aaaabb |
1mz4_A_5 | 1mz4 | A | 5 | 10 | PEVLTV | HHHHEE | aaaaxb |
1nnf_A_155 | 1nnf | A | 165 | 170 | LKENGK | HHHHEE | aaaaxb |
1o4y_A_161 | 1o4y | A | 162 | 167 | WFAQRM | HHHTEE | aaaabb |
1onc_*_3 | 1onc | - | 7 | 12 | QKKHIT | HHHHEE | aaaabb |
1qdm_A_279 | 1qdm | A | 279 | 284 | PEEYIL | HHHHEE | aaaabb |
1qoz_A_119 | 1qoz | A | 121 | 126 | AVSAVK | HHHHEE | aaaaxa |
1rvx_A_102 | 1rvx | A | 108 | 113 | QLSSVS | HHTTEE | aaaaba |
1ug9_A_477 | 1ug9 | A | 478 | 483 | EKWMFT | HHHHEE | aaaaxx |
1umz_A_234 | 1umz | A | 244 | 249 | RQKYTI | HHHTEE | aaaaxa |
1uwc_A_245 | 1uwc | A | 245 | 250 | DAHTTY | HHHHEE | aaaabb |
1vk4_A_141 | 1vk4 | A | 141 | 146 | QGFVRV | HHHHEE | aaaaxb |
2up1_A_11 | 2up1 | A | 11 | 16 | EQLRKL | HHHHEE | aaaabb |
3gcb_*_408 | 3gcb | - | 411 | 416 | FEEYCF | HHHHEE | aaaaba |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gpe_A_484 | 1gpe | A | MANALPHA-D-MANNOSE | F - 488 |
1gpe_A_484 | 1gpe | A | MANALPHA-D-MANNOSE | A - 489 |
1gpe_A_484 | 1gpe | A | NAGN-ACETYL-D-GLUCOSAMINE | G - 490 |
1gpe_A_484 | 1gpe | A | MANALPHA-D-MANNOSE | G - 490 |
1gpe_A_484 | 1gpe | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 491 |
1gpe_A_484 | 1gpe | A | MANALPHA-D-MANNOSE | E - 491 |
1gpe_A_484 | 1gpe | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 492 |
1gpe_A_484 | 1gpe | A | MANALPHA-D-MANNOSE | T - 492 |
1gpe_A_484 | 1gpe | A | NAGN-ACETYL-D-GLUCOSAMINE | L - 493 |
1mz4_A_5 | 1mz4 | A | GOLGLYCEROL | P - 11 |
1umz_A_234 | 1umz | A | XYSXYLOPYRANOSE | K - 246 |
1umz_A_234 | 1umz | A | NAGN-ACETYL-D-GLUCOSAMINE | I - 249 |
1umz_A_234 | 1umz | A | XYSXYLOPYRANOSE | Y - 250 |
1uwc_A_245 | 1uwc | A | FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID | H - 247 |
3gcb_*_408 | 3gcb | * | GOLGLYCEROL | V - 419 |
3gcb_*_408 | 3gcb | * | GOLGLYCEROL | V - 420 |
3gcb_*_408 | 3gcb | * | GOLGLYCEROL | D - 421 |
Clusters included in this Subclass |
CLUSTER: HE.0.5 |
CLUSTER: HE.1.13 |