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Information on SUBCLASS 0.1.7
Subclass Accession number: 5194
Subclass: 0.1.7 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 24

Average sequence ID (%) : 7.5 +/- 11.6
Average RMSD (Å) : 0.496 +/- 0.165

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXhX
(φψ)-conformation: aabb
Pattern: x[adegpqs]xx[acfilmvwy]xxx
Conservation:-0.1300.1760.803-1.2551.355-0.948-1.000-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8i_*_3291a8i   -329336FPDKVAIQHHHHEEEEaaaabbbb
1cjx_A_1361cjx   A137143YDIDFVY.HHHHEEE.aaaabbx.
1dfo_A_1351dfo   A136143SGKLYNIVHHHHSEEEaaaabxxb
1ez0_A_4161ez0   A426433LEEIAGRLHHTTEEEEaaaababb
1f8r_A_4051f8r   A408415IQSFCYPSHHHHEEEEaaaabbxa
1g61_A_21071g61   A21072113LGNLILT.HHHHEEE.aaaabbb.
1g62_A_1041g62   A104110LGNVICC.HHHHEEE.aaaabbb.
1g62_A_131g62   A1319IGVFSKL.HHHHEEE.aaaabbb.
1g62_A_1931g62   A193199VGAGMVV.HHHHEEE.aaaabbb.
1gc5_A_4041gc5   A413420LEKEFTEFHHHHSEEEaaaabxxa
1h16_A_5291h16   A538545AIKYAKVKHHHHSEEEaaaabbbb
1iar_B_291iar   B2936CSTELRLLHHHHEEEEaaaabbbx
1kl1_A_1311kl1   A132139SGVQYNFVHHHHSEEEaaaabxxb
1l1y_A_2351l1y   A235240LDLFTK..HHHHEE..aaaabx..
1l5w_A_2971l5w   A297304LADYEVIQHHHHEEEEaaaabbbx
1mjn_A_2821mjn   A282289ASEFVKILHHHHEEEEaaaabbbb
1n7o_A_8831n7o   A883888DQEVFK..HHHHEE..aaaabb..
1nth_A_4251nth   A425430FQECYD..HHHHEE..aaaabx..
1nvt_A_1781nvt   A178185FGEEVKFSHHHHEEEEaaaabbbb
1o4z_A_951o4z   A97102FLEKWD..HHHHEE..aaaabb..
1o54_A_2041o54   A213220KLQELPFIHHHHSSEEaaaabxbb
1p2z_A_4071p2z   A407413PDVRIIE.HHHHSEE.aaaabxb.
1s5a_A_641s5a   A6471YPKQIHLSHHHHEEEEaaaabbxa
2eql_*_612eql   -6166NKWWCK..HHHHEE..aaaabx..
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1s5a_A_641s5a   A     MSESELENOMETHIONINE Y - 64
1s5a_A_641s5a   A     ACTACETATE ION Y - 64
1s5a_A_641s5a   A     GOLGLYCEROL Y - 64
1s5a_A_641s5a   A     MSESELENOMETHIONINE P - 65
1s5a_A_641s5a   A     ACTACETATE ION I - 68
1s5a_A_641s5a   A     MSESELENOMETHIONINE L - 70
1s5a_A_641s5a   A     ACTACETATE ION L - 70
1s5a_A_641s5a   A     GOLGLYCEROL L - 70
1s5a_A_641s5a   A     MSESELENOMETHIONINE F - 73
1s5a_A_641s5a   A     GOLGLYCEROL F - 73

Clusters included in this Subclass
CLUSTER: HE.0.7
CLUSTER: HE.1.11