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Information on SUBCLASS 0.1.24
Subclass Accession number: 5211
Subclass: 0.1.24 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 15.2 +/- 17.1
Average RMSD (Å) : 0.425 +/- 0.139

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: pXhp
(φψ)-conformation: aabb
Pattern: [AEKQRT]x[cfilvw][afilvy][adepst]x[LM][KNQS]
Conservation:0.096-0.815-0.635-0.555-0.357-0.6572.0880.835
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1acc_*_6331acc   -633640KDIRKILSHHHHHTEEaaaaaaxa
1af7_*_2381af7   -246253RRFVPLLKHHHGGGEEaaaaaaxx
1dl5_A_1591dl5   A159166ETWFTQLKHHHHHHEEaaaaaaxx
1inl_A_1851inl   A189196QACYDALKHHHHHHEEaaaaaaxx
1jg1_A_1731jg1   A173180EPLIEQLKHHHHHTEEaaaaaaxx
1o89_A_2211o89   A225232AKVLAQMNHHHHHTEEaaaaaaxp
1qor_A_2221qor   A223230ERSLDCLQHHHHHTEEaaaaaabx
2prg_A_3112prg   A328335TMLASLMNHHHHHTEEaaaaaabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1af7_*_2381af7   *     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 244
1qor_A_2221qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 237
2prg_A_3112prg   A     BRL2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) H - 323
2prg_A_3112prg   A     BRL2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) I - 326
2prg_A_3112prg   A     BRL2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) Y - 327
2prg_A_3112prg   A     BRL2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) L - 330
2prg_A_3112prg   A     BRL2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) L - 333
2prg_A_3112prg   A     BRL2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) M - 334
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
2prg_A_3112prg   A CA1RESIDUES INVOLVED IN BINDING THE LXXLL COACTIVATOR HELIX.L - 311
2prg_A_3112prg   A CA1RESIDUES INVOLVED IN BINDING THE LXXLL COACTIVATOR HELIX.Q - 314
2prg_A_3112prg   A CA1RESIDUES INVOLVED IN BINDING THE LXXLL COACTIVATOR HELIX.V - 315
2prg_A_3112prg   A CA1RESIDUES INVOLVED IN BINDING THE LXXLL COACTIVATOR HELIX.L - 318
2prg_A_3112prg   A LB1THESE RESIDUES ARE INVOLVED IN LIGAND BINDING.H - 323
2prg_A_3112prg   A LB1THESE RESIDUES ARE INVOLVED IN LIGAND BINDING.Y - 327
2prg_A_3112prg   A LB1THESE RESIDUES ARE INVOLVED IN LIGAND BINDING.L - 330

Clusters included in this Subclass
CLUSTER: HE.0.15
CLUSTER: HE.1.37
CLUSTER: HE.2.84