Information on SUBCLASS 0.1.25 |
Subclass Accession number: 5212
Subclass: 0.1.25 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 14.3 +/- 21.9 Average RMSD (Å) : 0.529 +/- 0.206 Consensus geometry
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Consensus Sequence: | pXXX |
(φψ)-conformation: | aabb |
Pattern: | [ilmpt] | x | [DGKRST] | [EHQ] | x | x | x |
Conservation: | -0.405 | -0.174 | -0.204 | 2.188 | -0.227 | -0.930 | -0.249 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aop_*_426 | 1aop | - | 426 | 432 | PQRENSM | HHHHTEE | aaaaabb |
1aym_1_88 | 1aym | 1 | 88 | 94 | YNDQSFT | HHHHSEE | aaaaabb |
1dl2_A_291 | 1dl2 | A | 304 | 310 | MKKHLLA | HHHHTEE | aaaaaxb |
1hcu_A_263 | 1hcu | A | 276 | 282 | TIGHLGS | HHHHTEE | aaaaaxb |
1kre_A_285 | 1kre | A | 298 | 304 | TIKHLKS | HHHHTEE | aaaaapb |
1nxc_A_433 | 1nxc | A | 446 | 452 | IETHLIR | HHHHTEE | aaaaaxb |
1nxc_A_564 | 1nxc | A | 577 | 583 | LESHCRV | HHHHTEE | aaaaaxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aop_*_426 | 1aop | * | SRMSIROHEME | A - 433 |
1aym_1_88 | 1aym | 1 | DAOLAURIC ACID | W - 96 |
1nxc_A_564 | 1nxc | A | NAGN-ACETYL-D-GLUCOSAMINE | W - 569 |
Clusters included in this Subclass |
CLUSTER: HE.2.67 |