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Information on SUBCLASS 0.1.25
Subclass Accession number: 5212
Subclass: 0.1.25 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 14.3 +/- 21.9
Average RMSD (Å) : 0.529 +/- 0.206

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 0-45 rho (°): 135-180
Consensus Sequence: pXXX
(φψ)-conformation: aabb
Pattern: [ilmpt]x[DGKRST][EHQ]xxx
Conservation:-0.405-0.174-0.2042.188-0.227-0.930-0.249
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aop_*_4261aop   -426432PQRENSMHHHHTEEaaaaabb
1aym_1_881aym   18894YNDQSFTHHHHSEEaaaaabb
1dl2_A_2911dl2   A304310MKKHLLAHHHHTEEaaaaaxb
1hcu_A_2631hcu   A276282TIGHLGSHHHHTEEaaaaaxb
1kre_A_2851kre   A298304TIKHLKSHHHHTEEaaaaapb
1nxc_A_4331nxc   A446452IETHLIRHHHHTEEaaaaaxb
1nxc_A_5641nxc   A577583LESHCRVHHHHTEEaaaaaxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aop_*_4261aop   *     SRMSIROHEME A - 433
1aym_1_881aym   1     DAOLAURIC ACID W - 96
1nxc_A_5641nxc   A     NAGN-ACETYL-D-GLUCOSAMINE W - 569

Clusters included in this Subclass
CLUSTER: HE.2.67