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Information on SUBCLASS 1.2.9
Subclass Accession number: 5285
Subclass: 1.2.9 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 17.4 +/- 15.7
Average RMSD (Å) : 0.520 +/- 0.130

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXGLp
(φψ)-conformation: aalbb
Pattern: [GPV][DKNQT][akl][aimv][kr][EKS]x[FLT][AEQT][AET][aekq][GQ][IL][efk][AGP][DHKRT][FLVY][HIMVY][gqrs]
Conservation:-0.881-0.199-0.915-0.7680.6201.181-1.5390.278-0.0050.259-0.4022.1172.209-0.5470.325-0.6050.205-0.321-1.011
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j1u_A_791j1u   A86104GDYNKKVFEAMGLKAKYVYHHHHHHHHHHTT---EEEEaaaaaaaaaaavbxbxxbx
1lt8_A_2211lt8   A228246VKLMKEGLEAAQLKAHLMSHHHHHHHHHTTT---EEEEaaaaaaaaaaavxbbxxbb
1n5d_A_391n5d   A4260GQAAVKQLQAEGLSPRFHQHHHHHHHHHTTT---EEEEaaaaaaaaaaavxbxxbbx
1nh8_A_1171nh8   A117135PNLVRKDLATKGIEATVIRHHHHHHHHHHHT---EEEEaaaaaaaaaaavbxbbxbx
1vj7_A_2111vj7   A222240VTKIKSYTTEQGLFGDVYGHHHHHHHHHTTT---EEEEaaaaaaaaaaavbbbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lt8_A_2211lt8   A     CITCITRIC ACID T - 222
1lt8_A_2211lt8   A     CITCITRIC ACID I - 223
1n5d_A_391n5d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 41

Clusters included in this Subclass
CLUSTER: HE.5.112