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Information on SUBCLASS 1.2.12
Subclass Accession number: 5288
Subclass: 1.2.12 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 13.1 +/- 14.3
Average RMSD (Å) : 0.580 +/- 0.110

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XhcXX
(φψ)-conformation: aalbp
Pattern: [impy][ENRSY][AFLP][AE][AEQR]x[CFLT][GKN][ILT][AGRT][ACTV][AIKV][AKLV]
Conservation:-1.640-0.604-1.1991.4110.787-0.739-0.1861.7210.898-0.4260.428-0.022-0.428
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1i39_A_1081i39   A112124RELEEITGLRVVAHHHHHHH-SEEEEaaaaaaavbxbbx
1j5x_A_501j5x   A6072YYFERVLKIRTKAHHHHHHH--EEEEaaaaaaalbxbbb
1o9p_A_1571o9p   A157169IRPAAYCGTAAIKHHHHHHHT-EEEEaaaaaaavbxbbb
1ore_A_721ore   A7385PSLAQELGLGCVLHHHHHHTT-EEEEaaaaaaavbxbbb
1v8a_A_1441v8a   A152164MNAAREFNTTVAVHHHHHHTTSEEEEaaaaaaalbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j5x_A_501j5x   A     MSESELENOMETHIONINE S - 50
1j5x_A_501j5x   A     MSESELENOMETHIONINE S - 51
1j5x_A_501j5x   A     MSESELENOMETHIONINE L - 54
1j5x_A_501j5x   A     MSESELENOMETHIONINE T - 57
1j5x_A_501j5x   A     MSESELENOMETHIONINE I - 58
1j5x_A_501j5x   A     MSESELENOMETHIONINE Y - 60
1j5x_A_501j5x   A     MSESELENOMETHIONINE Y - 61
1j5x_A_501j5x   A     MSESELENOMETHIONINE F - 62
1j5x_A_501j5x   A     MSESELENOMETHIONINE V - 65
1o9p_A_1571o9p   A     MLAMALONIC ACID R - 158
1ore_A_721ore   A     AMPADENOSINE MONOPHOSPHATE K - 88
1v8a_A_1441v8a   A     ZNZINC ION T - 165

Clusters included in this Subclass
CLUSTER: HE.2.119
CLUSTER: HE.3.195