Information on SUBCLASS 1.2.13 |
Subclass Accession number: 5289
Subclass: 1.2.13 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 10.4 +/- 15.2 Average RMSD (Å) : 0.700 +/- 0.115 Consensus geometry
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Consensus Sequence: | XXcXh |
(φψ)-conformation: | aalbp |
Pattern: | [EHK] | [APQ] | x | x | x | [ALMV] | x | [AKS] | x | [GKN] | x | [AIP] | x | [GLTV] | [AILV] | x |
Conservation: | 2.014 | 0.535 | -0.302 | -1.779 | -0.275 | 0.543 | 0.135 | 0.931 | 0.326 | 0.994 | -0.205 | -0.386 | -0.888 | -1.568 | 0.859 | -0.935 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bwv_S_23 | 1bwv | S | 28 | 43 | KQIDYMISKKLAIGIE | HHHHHHHHTT-EEEEE | aaaaaaaaalxxbbbb |
1jj2_M_20 | 1jj2 | M | 21 | 36 | HQRLRLLKSGKPRLVA | HHHHHHHHT-S-EEEE | aaaaaaaaavbxxxxx |
1lvg_A_85 | 1lvg | A | 86 | 101 | EAVRAVQAMNRICVLD | HHHHHHHHTT-EEEEE | aaaaaaaaalbxxbbb |
1np7_A_22 | 1np7 | A | 22 | 37 | EPLHRALKSGLAITAV | HHHHHHHHTTSEEEEE | aaaaaaaaavbxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lvg_A_85 | 1lvg | A | ADPADENOSINE-5'-DIPHOSPHATE | D - 101 |
1lvg_A_85 | 1lvg | A | 5GPGUANOSINE-5'-MONOPHOSPHATE | D - 101 |
Clusters included in this Subclass |
CLUSTER: HE.4.174 |