Information on SUBCLASS 2.3.12 |
Subclass Accession number: 529
Subclass: 2.3.12 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 54451 (>75 %) 54452 (>75 %) 54453 (>75 %) |
Number of loops: 7 Average sequence ID (%) : 7.0 +/- 8.2 Average RMSD (Å) : 0.643 +/- 0.098 Consensus geometry
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Consensus Sequence: | XphpXX |
(φψ)-conformation: | bbeabb |
Pattern: | [ACGITV] | x | x | x | [cdsty] | x | x | x | [desty] | [gwy] | [EHNPQT] | x | [ltv] | [hilvy] | x |
Conservation: | 0.372 | -0.880 | -0.880 | -0.744 | -0.248 | 0.419 | -1.306 | -1.027 | -0.280 | 2.213 | 1.321 | -0.431 | 1.326 | 0.280 | -0.136 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c3m_A_79 | 1c3m | A | 81 | 95 | AISGTFGAYYHMTVV | EEEEEEEEETTEEEE | bbbebbbxbeabxbx |
1f2q_A_147 | 1f2q | A | 147 | 161 | GTYYCTGKVWQLDYE | EEEEEEEEETTEEEE | ebbbbbbxbeabbbb |
1giq_A_387 | 1giq | A | 391 | 405 | INKVDSYKDGTVTKL | EEEEEEEEETTEEEE | xabbbbbbbeabxbb |
1i58_A_430 | 1i58 | A | 431 | 445 | TLILSARHEGNNVVI | EEEEEEEEETTEEEE | bbbbbbbxbeabbbb |
1jss_A_130 | 1jss | A | 133 | 147 | VDFSYTVGYEEGLLS | EEEEEEEEETTEEEE | bbxbbbbxbeabbbb |
1nqe_A_452 | 1nqe | A | 464 | 478 | VEATANFDTGPLTHT | EEEEEEEEETTEEEE | bbbbbbbbbeaxbbb |
2sli_*_467 | 2sli | - | 468 | 482 | CKQYDYNFSGNNLIE | EEEEEEEEETTEEEE | bxxxbbbxbeaxxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c3m_A_79 | 1c3m | A | MANALPHA-D-MANNOSE | M - 92 |
1c3m_A_79 | 1c3m | A | MANALPHA-D-MANNOSE | V - 94 |
1f2q_A_147 | 1f2q | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 148 |
1i58_A_430 | 1i58 | A | ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | D - 449 |
1nqe_A_452 | 1nqe | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | I - 461 |
1nqe_A_452 | 1nqe | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | K - 462 |
1nqe_A_452 | 1nqe | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | G - 463 |
1nqe_A_452 | 1nqe | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | V - 464 |
1nqe_A_452 | 1nqe | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | A - 466 |
1nqe_A_452 | 1nqe | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | T - 467 |
1nqe_A_452 | 1nqe | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | A - 468 |
1nqe_A_452 | 1nqe | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | V - 479 |
1nqe_A_452 | 1nqe | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | S - 480 |
1nqe_A_452 | 1nqe | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | Y - 481 |
1nqe_A_452 | 1nqe | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | Y - 483 |
Clusters included in this Subclass |
CLUSTER: HA.1.31 |
CLUSTER: HA.2.81 |