Information on SUBCLASS 1.2.18 |
Subclass Accession number: 5294
Subclass: 1.2.18 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 16.7 +/- 14.5 Average RMSD (Å) : 0.833 +/- 0.058 Consensus geometry
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Consensus Sequence: | pXXhp |
(φψ)-conformation: | aalba |
Pattern: | x | [GL] | [ARS] | [VW] | [ALM] | [EGK] | [QS] | x | [EGN] | [AFL] | [KRY] | [AV] | x | [AKT] | [V] | x |
Conservation: | -1.298 | -0.839 | -0.176 | 0.330 | 0.073 | -0.301 | 1.035 | -0.924 | 0.073 | -0.550 | 0.073 | 0.897 | -0.360 | -0.301 | 2.942 | -0.675 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aor_A_189 | 1aor | A | 189 | 204 | VGAVMGSKNLKAIAVE | HHHHHHHTTEEEEEEE | aaaaaaaavxabbbbb |
1j18_A_28 | 1j18 | A | 34 | 49 | DLRWAKQNGFYAITVD | HHHHHHHTTEEEEEEE | aaaaaaaavxabbxbx |
1vjl_A_57 | 1vjl | A | 61 | 76 | LLSVLESLEARVDKVI | HHHHHHHTTEEEEEEE | aaaaaaaavbbxabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j18_A_28 | 1j18 | A | GLCGLUCOSE | T - 47 |
1j18_A_28 | 1j18 | A | GLCGLUCOSE | D - 49 |
1j18_A_28 | 1j18 | A | GLCGLUCOSE | W - 51 |
1vjl_A_57 | 1vjl | A | MSESELENOMETHIONINE | K - 74 |
1vjl_A_57 | 1vjl | A | MSESELENOMETHIONINE | I - 76 |
Clusters included in this Subclass |
CLUSTER: HE.1.63 |