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Information on SUBCLASS 1.4.1
Subclass Accession number: 5316
Subclass: 1.4.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 22

Average sequence ID (%) : 6.7 +/- 12.2
Average RMSD (Å) : 0.432 +/- 0.178

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 0-45 rho (°): 45-90
Consensus Sequence: XXXXX
(φψ)-conformation: aaapb
Pattern: [afgilmptv]xxxxxx
Conservation:-0.135-1.8490.3270.562-0.6361.2100.521
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bt3_A_2991bt3   A300306DWLNATFHHHT-EEaaaaxbb
1byu_A_311byu   A3339GEFEKKYHHHT-EEaaaaxbx
1cq3_A_1141cq3   A120126MIKDCEMHHHH-EEaaaapbb
1cvr_A_2561cvr   A259265ALMRAQKHHHH-EEaaaapbb
1dkf_B_2541dkf   B273278ICTRYT.HHTTEE.aaaaxb.
1dz4_A_2191dz4   A222228IVANGQVHHHT-EEaaaaxbb
1ewk_A_4471ewk   A453459FLIKSSFHHHT-EEaaaaxbb
1fcy_A_2561fcy   A275280ICTRYT.HHHTEE.aaaaxb.
1h54_A_221h54   A2632ESMTSLGHHHT-EEaaaaxbb
1jhs_A_1931jhs   A205211MVRKFHVHHHH-EEaaaaxbx
1jzt_A_541jzt   A5561TEKGKHVHHHT-EEaaaaxbb
1khb_A_4501khb   A456462VGAAMRSHHHT-EEaaaapbb
1l1q_A_51l1q   A814AHALIKTHHHT-EEaaaaxbb
1lg7_A_1021lg7   A112118GSSNLKAHHHT-EEaaaaxbx
1nbf_A_3191nbf   A321327PKLFRGKHHHH-EEaaaaxbb
1o7f_A_3441o7f   A350356LAGVLIFHHHH-EEaaaapbb
1o8a_A_1291o8a   A145151TYSVATVHHHT-EEaaaaxbb
1qba_*_291qba   -3440QLSQLKLHHTT-EEaaaaxbx
1qks_A_1391qks   A142148MRESWKVHHHH-EEaaaaxbb
1r42_A_1101r42   A126132IYSTGKVHHHH-EEaaaaxbb
1tol_A_1981tol   A203209VFKNAPLHHTT-EEaaaaxxb
1vjg_A_861vjg   A8692LNDTTLEHHHH-EEaaaapxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cvr_A_2561cvr   A     CACALCIUM ION E - 258
1cvr_A_2561cvr   A     CACALCIUM ION R - 262
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID L - 266
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID I - 268
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID L - 269
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID I - 270
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID L - 271
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID R - 272
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID I - 273
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID C - 274
1dkf_B_2541dkf   B     BMS4-[(4,4-DIMETHYL-1,2,3,4-TETRAHYDRO-[1,2'] BINAPTHALENYL-7-CARBONYL)-AMINO]-BENZOIC ACID R - 276
1fcy_A_2561fcy   A     LMUDODECYL-ALPHA-D-MALTOSIDE I - 260
1fcy_A_2561fcy   A     LMUDODECYL-ALPHA-D-MALTOSIDE L - 263
1fcy_A_2561fcy   A     LMUDODECYL-ALPHA-D-MALTOSIDE K - 264
1fcy_A_2561fcy   A     LMUDODECYL-ALPHA-D-MALTOSIDE A - 265
1fcy_A_2561fcy   A     LMUDODECYL-ALPHA-D-MALTOSIDE C - 267
1fcy_A_2561fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID L - 268
1fcy_A_2561fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID I - 270
1fcy_A_2561fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID L - 271
1fcy_A_2561fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID M - 272
1fcy_A_2561fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID R - 274
1fcy_A_2561fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID I - 275
1fcy_A_2561fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID R - 278
1khb_A_4501khb   A     EDO1,2-ETHANEDIOL W - 450
1khb_A_4501khb   A     EDO1,2-ETHANEDIOL Q - 451
1khb_A_4501khb   A     EDO1,2-ETHANEDIOL G - 453
1lg7_A_1021lg7   A     CEAS-HYDROXY-CYSTEINE L - 108
1lg7_A_1021lg7   A     CEAS-HYDROXY-CYSTEINE L - 111
1lg7_A_1021lg7   A     CEAS-HYDROXY-CYSTEINE G - 112
1lg7_A_1021lg7   A     CEAS-HYDROXY-CYSTEINE N - 115

Clusters included in this Subclass
CLUSTER: HE.0.13
CLUSTER: HE.1.39
CLUSTER: HE.2.23
CLUSTER: HE.3.147