Information on SUBCLASS 2.1.2 |
Subclass Accession number: 5322
Subclass: 2.1.2 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 98 Average sequence ID (%) : 17.5 +/- 18.0 Average RMSD (Å) : 0.556 +/- 0.198 Consensus geometry
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Consensus Sequence: | XXcXXh |
(φψ)-conformation: | aalpbb |
Pattern: | [acfilmvwy] | [acgiklmtv] | [adegknqrs] | [adeknqrst] | x | [degknqrs] | [acfgiklmtv] | [deknpqrst] | [acfgilmvwy] | x |
Conservation: | -0.186 | -0.264 | 0.113 | 0.046 | -0.942 | 2.492 | -0.628 | -0.003 | 0.457 | -1.087 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aco_*_183 | 1aco | - | 187 | 196 | VDVMAGIPWE | HHHHHT--EE | aaaaavxpxb |
1aj2_*_125 | 1aj2 | - | 128 | 137 | AAAETGLPVC | HHHHHT--EE | aaaaavxpbb |
1atg_*_12 | 1atg | - | 22 | 31 | FAKQTGHAVV | HHHHH---EE | aaaaavxbbb |
1ax4_A_203 | 1ax4 | A | 212 | 221 | IAKQHGIFVV | HHHHHT--EE | aaaaavxxbb |
1bfd_*_47 | 1bfd | - | 57 | 66 | YAQASRKPAF | HHHHHTS-EE | aaaaavbxbb |
1bvu_A_221 | 1bvu | A | 230 | 239 | MSEEYGMKVV | HHHHH--EEE | aaaaavxbxa |
1byf_A_36 | 1byf | A | 45 | 54 | FTEVKGHDYW | HHHHHT--EE | aaaaavbxbx |
1c7g_A_194 | 1c7g | A | 203 | 212 | MASTYGIKIF | HHHHHT--EE | aaaaavxxbb |
1ccw_B_48 | 1ccw | B | 54 | 63 | LAKKKGITMA | HHHHHT--EE | aaaaavxxxx |
1cer_O_10 | 1cer | O | 18 | 27 | ILHSRGVEVA | HHHHHT--EE | aaaaavxxba |
1cnz_A_16 | 1cnz | A | 30 | 39 | VRSRFDMRIT | HHHHHT--EE | aaaNalxbbb |
1cp2_A_190 | 1cp2 | A | 196 | 205 | FAKELGSQLI | HHHHHT--EE | aaaaavbbxa |
1cyd_A_109 | 1cyd | A | 121 | 130 | DMINRGVPGS | HHHHHT--EE | aaaaavbwbb |
1dp4_A_87 | 1dp4 | A | 96 | 105 | FTAHWRVPLL | HHHHHT--EE | aaaaalbxbb |
1e5x_A_194 | 1e5x | A | 202 | 211 | YCASAGIPSI | HHHHHT--EE | aaaaavbpbb |
1ekk_A_71 | 1ekk | A | 83 | 92 | SANEHGVPVI | HHHHHT--EE | aaaaavxpbb |
1elu_A_115 | 1elu | A | 124 | 133 | IAARFGITYR | HHHHH--EEE | aaaaavxbbb |
1ep7_A_10 | 1ep7 | A | 19 | 28 | KGKEEHKPIV | HHHHHT--EE | aaaaalbxbb |
1eq2_A_94 | 1eq2 | A | 103 | 112 | YCLEREIPFL | HHHHHT--EE | aaaaalxpbb |
1ez0_A_157 | 1ez0 | A | 161 | 170 | SALAAGCPVI | HHHHHT--EE | aaaaagbxbb |
1ff9_A_109 | 1ff9 | A | 111 | 120 | AAKDAGITVM | HHHHTT-EEE | aaaaavbbbx |
1fjh_A_170 | 1fjh | A | 172 | 181 | AWGEAGVRLN | HHHHTT-EEE | aaaaavbxbb |
1fp6_A_192 | 1fp6 | A | 199 | 208 | LANKLGTQMI | HHHHHT--EE | aaaaavbbxa |
1fts_*_456 | 1fts | - | 460 | 469 | VADQFGIPIR | HHHHH---EE | aaaaavxpxa |
1gs5_A_213 | 1gs5 | A | 224 | 233 | AARTLGRPVD | HHHHHTS-EE | aaaaavbxbb |
1gud_A_14 | 1gud | A | 26 | 35 | EAKTLGVSVD | HHHHHT--EE | aaaaavbbbb |
1h6d_A_187 | 1h6d | A | 196 | 205 | AAKAANKKLM | HHHHHT--EE | aaaaavbxbb |
1h7m_A_43 | 1h7m | A | 52 | 61 | YARLSGIPVY | HHHHHT--EE | aaaaavbxbb |
1i24_A_239 | 1i24 | A | 245 | 254 | VQAAVGHPLT | HHHHHT--EE | aaaaavxxxx |
1i7n_A_286 | 1i7n | A | 295 | 304 | VVALTQTYAT | HHHHHT--EE | aaaaalbxbb |
1ii5_A_30 | 1ii5 | A | 38 | 47 | VAESQKWNSE | HHHHHT--EE | aaaaavxxbb |
1iir_A_103 | 1iir | A | 112 | 121 | VAEKLGIPYF | HHHHHT--EE | aaaaavbxbb |
1iir_A_311 | 1iir | A | 316 | 325 | VAARAGAPQI | HHHHHT--EE | aaaaavxpbb |
1in4_A_64 | 1in4 | A | 71 | 80 | IASELQTNIH | HHHHHT--EE | aaaaalbxbb |
1itw_A_463 | 1itw | A | 476 | 485 | RARATNTPAV | HHHHHT--EE | aaaaalbpbb |
1j18_A_346 | 1j18 | A | 356 | 365 | LANEKGIVLN | HHHHHT--EE | aaaaavxpbb |
1j8m_F_140 | 1j8m | F | 148 | 157 | LGQQIGVPVY | HHHHHT--EE | aaaaavbxbx |
1jbw_A_202 | 1jbw | A | 211 | 220 | KVATTGSQWL | HHHHHT--EE | aaaaavxxbb |
1jdp_A_92 | 1jdp | A | 101 | 110 | LASHWDLPML | HHHHHT--EE | aaaaavbwbb |
1jeh_A_376 | 1jeh | A | 378 | 387 | QLKEAGIDYK | HHHHHT--EE | aaaaavxxbb |
1jet_A_369 | 1jet | A | 382 | 391 | WKKNLGVNVN | HHHHH--EEE | aaaaavxbbb |
1jf9_A_128 | 1jf9 | A | 133 | 142 | LCARVGAELR | HHHHHT-EEE | aaaaavbbxx |
1jx6_A_210 | 1jx6 | A | 223 | 232 | VNRDNNFELQ | HHHHH--EEE | aaaaalxbxa |
1k87_A_342 | 1k87 | A | 359 | 368 | LARQYDIGIN | HHHHHT--EE | aaaaalbxbb |
1kao_*_128 | 1kao | - | 134 | 143 | LAEEWGCPFM | HHHHHTS-EE | aaaaavbxbb |
1kew_A_207 | 1kew | A | 213 | 222 | LNALEGKPLP | HHHHHT--EE | aaaaavxxbw |
1kfi_A_356 | 1kfi | A | 360 | 369 | VAAKNGIKLF | HHHHHT--EE | aaaaavbxbb |
1khd_A_103 | 1khd | A | 109 | 118 | VAASCGAKVA | HHHHHT--EE | aaaaagxxbb |
1kid_*_230 | 1kid | - | 239 | 248 | AVAKAGKPLL | HHHHHT--EE | aaaaavbxbb |
1ko7_A_4 | 1ko7 | A | 7 | 16 | LVERFELEMI | HHHHHT-EEE | aaaaalxxxa |
1kz1_A_94 | 1kz1 | A | 109 | 118 | VGLDSGVPVI | HHHHH---EE | aaaaavxpbx |
1kzy_C_1813 | 1kzy | C | 1817 | 1826 | LCLASGIPCV | HHHHHT--EE | aaaaavxxxb |
1kzy_C_1928 | 1kzy | C | 1933 | 1942 | CAEALQLPVV | HHHHHT--EE | aaaaavxxbb |
1l4u_A_15 | 1l4u | A | 22 | 31 | LAKALGVGLL | HHHHHT--EE | aaaaavbxbb |
1leh_A_206 | 1leh | A | 212 | 220 | AVAEEGADA. | HHHHH--EE. | aaaaalxxx. |
1ltz_A_80 | 1ltz | A | 87 | 96 | LMAATGWKIV | HHHHHS-EEE | aaaaavxbxb |
1lv7_A_201 | 1lv7 | A | 208 | 217 | IAGEAKVPFF | HHHHHT--EE | aaaaalbxbb |
1m1n_A_276 | 1m1n | A | 286 | 295 | MEEKYGIPWM | HHHHH---EE | aaaaavxxbb |
1m1n_B_234 | 1m1n | B | 243 | 252 | MLSEMGVGYS | HHHHHT--EE | aaaaavxxbb |
1m2o_A_355 | 1m2o | A | 361 | 370 | LTDSTGGVLL | HHHHHT--EE | aaaaavxxbb |
1m65_A_173 | 1m65 | A | 179 | 188 | AVRDAGGWVA | HHHHHT--EE | aaaaavxxbb |
1mh3_A_232 | 1mh3 | A | 234 | 243 | NIDTSKVNYG | HHHHHT--EE | aaaaavpxbb |
1msk_*_1157 | 1msk | - | 1157 | 1165 | VEKHTGMKL. | HHHHH--EE. | aaaaavxbb. |
1n2z_A_91 | 1n2z | A | 96 | 105 | QLASLGIKVM | HHHHHT--EE | aaaaagxxbb |
1nu0_A_71 | 1nu0 | A | 83 | 92 | IHGRFGVEVK | HHHHH---EE | aaaaavxxbb |
1o58_A_63 | 1o58 | A | 71 | 80 | IGAKRGHRVI | HHHHHT--EE | aaaaavbxbb |
1o5z_A_202 | 1o5z | A | 211 | 220 | VARKKSSRMY | HHHHHT--EE | aaaaalxxbb |
1o6d_A_78 | 1o6d | A | 87 | 96 | DLEMKGKDIT | HHHHHT--EE | aaaaavxxbb |
1o7t_A_10 | 1o7t | A | 20 | 29 | FTRATGIKVK | HHHHH---EE | aaaaavxxbb |
1o98_A_95 | 1o98 | A | 103 | 112 | HVKQHGTSLH | HHHHHT--EE | aaaaavbbbb |
1oas_A_71 | 1oas | A | 79 | 88 | VAAARGYKLT | HHHHHT--EE | aaaaavbxbb |
1ols_A_258 | 1ols | A | 271 | 280 | RAVAENQPFL | HHHHHT--EE | aaaaalbxbb |
1on3_A_114 | 1on3 | A | 126 | 135 | QALLTGTPFL | HHHHHT--EE | aaaaavbxbb |
1oth_A_227 | 1oth | A | 236 | 245 | YAKENGTKLL | HHHHHT--EE | aaaaavbbbb |
1ozh_A_224 | 1ozh | A | 230 | 239 | LLETSHIPVT | HHHHH---EE | aaaaalxpbb |
1ozh_A_57 | 1ozh | A | 67 | 76 | VGRITGKAGV | HHHHHSS-EE | aaaaavbpxb |
1p1j_A_303 | 1p1j | A | 308 | 317 | LAEHEGTFIA | HHHHHT--EE | aaaaavbxbb |
1p3j_A_13 | 1p3j | A | 20 | 29 | IVEDYGIPHI | HHHHHT--EE | aaaaavbwbb |
1psz_A_260 | 1psz | A | 265 | 274 | VSQDTNIPIY | HHHHHT--EE | aaaaavxxxa |
1pvd_A_228 | 1pvd | A | 234 | 243 | LIDLTQFPAF | HHHHH---EE | aaaaavxxbb |
1pwb_A_274 | 1pwb | A | 283 | 292 | LVVAKNEAAF | HHHHHT--EE | aaaaalbxbx |
1q0s_A_187 | 1q0s | A | 199 | 208 | SLNDRGIKFG | HHHHHT--EE | aaaaavxxbb |
1qb7_A_87 | 1qb7 | A | 90 | 99 | IAVELEIPFV | HHHHHT--EE | aaaaavbxbb |
1qgu_A_274 | 1qgu | A | 284 | 293 | MEEKHQIPWM | HHHHH---EE | aaaaavxpbb |
1qlt_A_80 | 1qlt | A | 89 | 98 | LANKFSFPLW | HHHHHT--EE | aaaaalbwbb |
1qmh_A_50 | 1qmh | A | 59 | 68 | ATEICGATVE | HHHHHT-EEE | aaaaalxbbb |
1r89_A_18 | 1r89 | A | 34 | 43 | RLDELGVEYV | HHHHHT--EE | aaaaavxxbb |
1rj9_B_141 | 1rj9 | B | 148 | 157 | LGEKVGVPVL | HHHHHT--EE | aaaaavbpbb |
1s4q_A_103 | 1s4q | A | 108 | 117 | AAAATGVPVL | HHHHHT--EE | aaaaavxxbb |
1srv_A_282 | 1srv | A | 292 | 301 | IAAVTGGTVI | HHHHHT--EE | aaaaavxbxx |
1upa_A_233 | 1upa | A | 239 | 248 | LAERLNIPVI | HHHHHT--EE | aaaaalbxbb |
1uv7_A_88 | 1uv7 | A | 95 | 104 | STRQFNIELI | HHHHHT--EE | aaaaavxxxa |
1uyr_A_1598 | 1uyr | A | 1610 | 1619 | YARKRGIPRI | HHHHHT--EE | aaaaavxpbb |
1v8a_A_69 | 1v8a | A | 81 | 90 | IANELGKPIV | HHHHHT--EE | aaaaavxxbb |
1vjl_A_113 | 1vjl | A | 119 | 128 | LAVKTGAPIF | HHHHHT--EE | aaaaavxxbb |
1vk3_A_116 | 1vk3 | A | 125 | 134 | YGNSIGVPTV | HHHHHT--EE | aaaaavbxxa |
1zin_*_13 | 1zin | - | 20 | 29 | IVAAYGIPHI | HHHHH---EE | aaaaavbxbb |
1zpd_A_226 | 1zpd | A | 232 | 241 | FTDALGGAVA | HHHHH---EE | aaaaavxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ax4_A_203 | 1ax4 | A | LPAPYRIDOXAL 5-PHOSPHATE BINDING SITE. | M - 222 |
1gud_A_14 | 1gud | A | ZN3ZN BINDING SITE FOR CHAIN A | D - 35 |
1qmh_A_50 | 1qmh | A | RB1CITRATE BINDING SITE THAT IS INTERPRETED AS A PUTATIVE RNA BINDING SITE | Q - 51 |
Clusters included in this Subclass |
CLUSTER: HE.2.3 |