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Information on SUBCLASS 2.1.10
Subclass Accession number: 5330
Subclass: 2.1.10 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 11.5 +/- 13.2
Average RMSD (Å) : 0.744 +/- 0.213

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 270-315
Consensus Sequence: XXchpX
(φψ)-conformation: aalpbp
Pattern: xxx[iltv]x[DEGKQR]xx[dgkt][AFVY][AEKRST]xx
Conservation:-0.285-1.000-1.3961.291-0.6331.447-0.039-0.5711.0111.0470.769-0.357-1.283
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a7t_A_571a7t   A6476VNWVTDSLHAKVTHHHHHHHH--EEEaaaaaaaalbbxa
1dbx_A_1411dbx   A141153PQDLAKVLGAEFTHHHHHHHHT-EEEaaaaaaaavxbxb
1gx1_A_731gx1   A8092AWRRIQAKGYTLGHHHHHHHTT-EEEaaaaaaaavxbxa
1hc7_A_4301hc7   A433445ERLIQEETTATTRHHHHHHHH--EEEaaaaaaaavxbxa
1jo0_A_571jo0   A6476INAIVRETKAAQVHHHHHHHH--EEEaaaaaaaavxxxa
1p0h_A_2881p0h   A290302AVRTYQSLGFTTYHHHHHHHTT-EEEaaaaaaaavxbxa
1r9c_A_151r9c   A1931TRILEGVFDAREVHHHHHHHH--EEEaaaaaaaalpbxa
1uv7_A_1221uv7   A129141IAYLQERQGVSVDHHHHHHHS--EEEaaaaaaaavbxxa
1vhs_A_1251vhs   A127139SLKLFEKHGFAEWHHHHHHHTT-EEEaaaaaaaavxbxa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gx1_A_731gx1   A     MSESELENOMETHIONINE G - 92
1gx1_A_731gx1   A     MSESELENOMETHIONINE N - 93
1gx1_A_731gx1   A     MSESELENOMETHIONINE I - 98
1gx1_A_731gx1   A     CDFCYTIDINE-5'-DIPHOSPHATE I - 98
1gx1_A_731gx1   A     CDFCYTIDINE-5'-DIPHOSPHATE I - 99
1hc7_A_4301hc7   A     ZNZINC ION C - 432
1hc7_A_4301hc7   A     ZNZINC ION E - 433
1hc7_A_4301hc7   A     ZNZINC ION I - 436
1jo0_A_571jo0   A     GOLGLYCEROL Q - 61
1jo0_A_571jo0   A     GOLGLYCEROL I - 64
1jo0_A_571jo0   A     GOLGLYCEROL N - 65
1jo0_A_571jo0   A     GOLGLYCEROL A - 66
1jo0_A_571jo0   A     GOLGLYCEROL V - 68
1jo0_A_571jo0   A     GOLGLYCEROL R - 69
1jo0_A_571jo0   A     GOLGLYCEROL Q - 75
1p0h_A_2881p0h   A     COACOENZYME A V - 288
1p0h_A_2881p0h   A     ACOACETYL COENZYME *A V - 288
1p0h_A_2881p0h   A     COACOENZYME A A - 289
1p0h_A_2881p0h   A     ACOACETYL COENZYME *A A - 289
1p0h_A_2881p0h   A     COACOENZYME A A - 290
1p0h_A_2881p0h   A     ACOACETYL COENZYME *A A - 290
1p0h_A_2881p0h   A     COACOENZYME A R - 292
1p0h_A_2881p0h   A     ACOACETYL COENZYME *A R - 292
1p0h_A_2881p0h   A     COACOENZYME A T - 293
1p0h_A_2881p0h   A     ACOACETYL COENZYME *A T - 293
1p0h_A_2881p0h   A     COACOENZYME A Y - 294
1p0h_A_2881p0h   A     ACOACETYL COENZYME *A Y - 294
1p0h_A_2881p0h   A     COACOENZYME A S - 296
1p0h_A_2881p0h   A     ACOACETYL COENZYME *A S - 296
1p0h_A_2881p0h   A     ACOACETYL COENZYME *A Y - 308
1uv7_A_1221uv7   A     MSESELENOMETHIONINE D - 141
1vhs_A_1251vhs   A     MSESELENOMETHIONINE K - 125
1vhs_A_1251vhs   A     MSESELENOMETHIONINE P - 126
1vhs_A_1251vhs   A     MSESELENOMETHIONINE F - 136
1vhs_A_1251vhs   A     MSESELENOMETHIONINE W - 139
1vhs_A_1251vhs   A     MSESELENOMETHIONINE A - 146
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hc7_A_4301hc7   A ZN1ZN BINDING SITE FOR CHAIN AC - 432

Clusters included in this Subclass
CLUSTER: HE.3.88