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Information on SUBCLASS 2.3.8
Subclass Accession number: 5370
Subclass: 2.3.8 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 10.4 +/- 16.9
Average RMSD (Å) : 0.690 +/- 0.145

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: pXhpXX
(φψ)-conformation: aababb
Pattern: [aflv]x[AEKRS][aefklm][afgitv][DKPS]xx[aclvy]
Conservation:-0.009-0.7971.305-0.703-0.5051.990-0.919-0.035-0.328
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f0k_A_2481f0k   A251259AYAWADVVVHHHH-SEEEaaaaxabbb
1h76_A_1451h76   A149157VASFFSSSCHHHHSSEEEaaaaxabbb
1hdi_A_1431hdi   A153161LSALGDVYVHHHT-SEEEaaaababbb
1iej_A_1481iej   A152160VAKFFSASCHHHHSSEEEaaaaxabbb
1lzj_A_1981lzj   A200208FLSEVDYLVHHHH-SEEEaaaababbb
1mdw_A_3281mdw   A331339FLRHYSRLEHHHH--EEEaaaaxabbb
1n7m_H_1831n7m   H185193DYEKHKVYAHHHH--EEEaaaabaxbb
1q5d_A_291q5d   A3543LREATPIFYHHHH-SEEEaaaababbx
4ubp_A_734ubp   A7381VPEMIDDIQHHHH-SEEEaaaaxabbb
7req_B_6067req   B609617AEKLIDGRLHHHH--EEEaaaababbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lzj_A_1981lzj   A     HGMERCURY (II) ION F - 200
1lzj_A_1981lzj   A     HGMERCURY (II) ION L - 207
1lzj_A_1981lzj   A     HGMERCURY (II) ION V - 208
1lzj_A_1981lzj   A     HGMERCURY (II) ION C - 209
1lzj_A_1981lzj   A     HGMERCURY (II) ION V - 210
1lzj_A_1981lzj   A     UDPURIDINE-5'-DIPHOSPHATE V - 210

Clusters included in this Subclass
CLUSTER: HE.1.33
CLUSTER: HE.2.78
CLUSTER: HE.3.285