Information on SUBCLASS 2.3.17 |
Subclass Accession number: 5379
Subclass: 2.3.17 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 4.1 (>75 %) 4.1.2 (>75 %) GO : GO:0005515 (>75 %) GO:0016829 (>75 %) GO:0016830 (>75 %) GO:0016832 (>75 %) GO:0051082 (>75 %) SCOP : 53066 (>75 %) 53067 (>75 %) 53068 (>75 %) 53638 (>75 %) 53639 (>75 %) 53640 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 23.7 +/- 36.1 Average RMSD (Å) : 0.450 +/- 0.100 Consensus geometry
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Consensus Sequence: | ppppXX |
(φψ)-conformation: | aababb |
Pattern: | [DR] | [AET] | [AIL] | [CGS] | [EQ] | [hr] | [ATV] | [AK] | x | [AET] | [LM] | [KQS] | [KNS] | [HRS] | [KST] | [aq] | [ATV] | x | [ILW] |
Conservation: | 0.475 | -0.658 | -0.397 | -0.494 | 2.787 | -0.511 | -0.219 | 0.330 | -0.951 | -0.658 | 2.204 | 0.221 | 0.383 | -0.250 | -0.056 | -1.422 | -0.219 | -0.463 | -0.103 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bup_A_257 | 1bup | A | 264 | 282 | RTACERAKRTLSSSTQASI | HHHHHHHHHHHTTSSEEEE | aaaaaaaaaaaaababbbb |
1e4c_P_134 | 1e4c | P | 134 | 152 | RELSEHVALALKNRKATLL | HHHHHHHHHHTSS-SEEEE | aaaaaaaaaaaaababbxb |
1ojr_A_191 | 1ojr | A | 191 | 209 | DAIGQATAQEMQKHSLVLW | HHHHHHHHHHHTT-SEEEE | aaaaaaaaaaaaababbxb |
1s3x_A_257 | 1s3x | A | 264 | 282 | RTACERAKRTLSSSTQASL | HHHHHHHHHHTTTSSEEEE | aaaaaaaaaaaaababbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bup_A_257 | 1bup | A | ADPADENOSINE-5'-DIPHOSPHATE | E - 268 |
1bup_A_257 | 1bup | A | ADPADENOSINE-5'-DIPHOSPHATE | K - 271 |
1bup_A_257 | 1bup | A | ADPADENOSINE-5'-DIPHOSPHATE | R - 272 |
1bup_A_257 | 1bup | A | ADPADENOSINE-5'-DIPHOSPHATE | T - 273 |
1bup_A_257 | 1bup | A | ADPADENOSINE-5'-DIPHOSPHATE | S - 275 |
1e4c_P_134 | 1e4c | P | ZNZINC ION | L - 152 |
1ojr_A_191 | 1ojr | A | ZNZINC ION | W - 209 |
1ojr_A_191 | 1ojr | A | PO4PHOSPHATE ION | W - 209 |
1ojr_A_191 | 1ojr | A | 2HADIHYDROXYACETONE | W - 209 |
1s3x_A_257 | 1s3x | A | ADPADENOSINE-5'-DIPHOSPHATE | S - 276 |
Clusters included in this Subclass |
CLUSTER: HE.4.362 |
CLUSTER: HE.5.382 |