Information on SUBCLASS 2.3.21 |
Subclass Accession number: 538
Subclass: 2.3.21 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0003723 (>50 %) GO:0003724 (>50 %) GO:0003746 (>50 %) GO:0003968 (>50 %) GO:0004386 (>50 %) GO:0005524 (>50 %) GO:0005525 (>50 %) GO:0008135 (>50 %) GO:0008233 (>50 %) GO:0008234 (>50 %) GO:0016772 (>50 %) GO:0016779 (>50 %) GO:0017076 (>50 %) GO:0019001 (>50 %) GO:0030554 (>50 %) SCOP : 50464 (>50 %) 50465 (>50 %) 50466 (>50 %) 50493 (>50 %) 50494 (>50 %) 50603 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 16.7 +/- 21.7 Average RMSD (Å) : 0.800 +/- 0.265 Consensus geometry
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Consensus Sequence: | hpcpXX |
(φψ)-conformation: | abeabb |
Pattern: | [GVW] | x | [FLM] | [NTV] | [AGT] | x | [GY] | [IV] | [KY] | [DN] | [DR] | x | x | [LVY] | [AV] | [PR] |
Conservation: | -1.316 | -0.964 | 0.328 | -0.846 | -0.611 | -0.504 | 0.120 | 1.827 | 0.962 | 1.955 | 0.173 | -0.494 | -1.316 | -0.377 | 0.338 | 0.726 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cqq_A_23 | 1cqq | A | 23 | 38 | GKFTGLGVYDRFVVVP | EEEEEEEEEBTEEEEE | ebbxxbxabeaxbbbp |
1hav_A_25 | 1hav | A | 27 | 42 | WVMNALGVKDDWLLVP | EEEEEEEEEBTEEEEE | xabbbbxabeabbbbx |
1uvq_B_23 | 1uvq | B | 24 | 39 | VRLVTRYIYNREEYAR | EEEEEEEEETTEEEEE | bbbbxbbbbeabxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1uvq_B_23 | 1uvq | B | AC8ACY BINDING SITE FOR CHAIN B | N - 33 |
1uvq_B_23 | 1uvq | B | AC8ACY BINDING SITE FOR CHAIN B | E - 35 |
Clusters included in this Subclass |
CLUSTER: HA.1.109 |