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Information on SUBCLASS 2.4.4
Subclass Accession number: 5390
Subclass: 2.4.4 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 14.1 +/- 18.2
Average RMSD (Å) : 0.580 +/- 0.301

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: ppXXhX
(φψ)-conformation: aalaba
Pattern: [ILMTV][degk]x[GLW]x[adekq][aeknqrs][dgknqr]x[ILV]x[dkrstwy][acilmvy]xx
Conservation:1.598-0.346-1.0090.664-0.3940.3460.039-0.339-0.5552.689-0.713-0.815-0.015-0.804-0.345
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1brm_A_1351brm   A144158LGGLFANDLVDWVSVHHHHHTTT-EEEEEEaaaaaaalaxabbbb
1go4_A_591go4   A7286LKDWLYKCSVQKLVVHHHHHHTT-EEEEEEaaaaaaalaxabbbb
1j4a_A_2421j4a   A245259VIRGLDSGKIFGYAMHHHHHHHTSEEEEEEaaaaaaavaxabbbb
1jms_A_3551jms   A366380TDFWKQQGLLLYCDIHHHHHHTT-EEEEEEaaaaaaavaxabbbb
1jn3_A_2081jn3   A215229VEQLQKVRFITDTLSHHHHHHTT-EEEEEEaaaaaaavaxabbab
1mb4_A_1341mb4   A143157LGGLYERGLVEWMSAHHHHHHTT-EEEEEEaaaaaaalaxabbbb
1mwq_A_211mwq   A2842LKQLQAENRLLTAGPHHHHHHTT-EEEEEEaaaaaaalababbex
1nwc_A_1361nwc   A145159IGGLFEKDLVEWISVHHHHHHTT-EEEEEEaaaaaaalaxabbbb
1ooy_A_601ooy   A6074LGLLLQSKQIKRMISHHHHHHTT-EEEEEEaaaaaaalababbbb
2cev_A_2482cev   A255269MEMLAEAQIITSAEFHHHHHHHT-EEEEEEaaaaaaavaxabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mb4_A_1341mb4   A     CYSCYSTEINE C - 134
1mb4_A_1341mb4   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C - 134
1mb4_A_1341mb4   A     CYSCYSTEINE T - 135
1mwq_A_211mwq   A     ZNZINC ION R - 21
1mwq_A_211mwq   A     1PEPENTAETHYLENE GLYCOL R - 21
1mwq_A_211mwq   A     1PEPENTAETHYLENE GLYCOL E - 22
1mwq_A_211mwq   A     1PEPENTAETHYLENE GLYCOL Q - 23
1mwq_A_211mwq   A     ZNZINC ION H - 24
1mwq_A_211mwq   A     ZNZINC ION L - 25
1mwq_A_211mwq   A     1PEPENTAETHYLENE GLYCOL L - 25
1mwq_A_211mwq   A     1PEPENTAETHYLENE GLYCOL A - 26
1mwq_A_211mwq   A     ZNZINC ION L - 28
1mwq_A_211mwq   A     1PEPENTAETHYLENE GLYCOL K - 29
1mwq_A_211mwq   A     CACCACODYLATE ION N - 35
1mwq_A_211mwq   A     ZNZINC ION R - 36
1mwq_A_211mwq   A     CACCACODYLATE ION R - 36
1mwq_A_211mwq   A     CACCACODYLATE ION L - 37
1mwq_A_211mwq   A     CACCACODYLATE ION L - 38
1mwq_A_211mwq   A     ZNZINC ION A - 40
1mwq_A_211mwq   A     ZNZINC ION G - 41
1mwq_A_211mwq   A     ZNZINC ION P - 42
1mwq_A_211mwq   A     MSESELENOMETHIONINE P - 44
2cev_A_2482cev   A     GAIGUANIDINE Y - 248
2cev_A_2482cev   A     GAIGUANIDINE R - 249
2cev_A_2482cev   A     GAIGUANIDINE E - 250
2cev_A_2482cev   A     GAIGUANIDINE H - 252
2cev_A_2482cev   A     GAIGUANIDINE L - 253
2cev_A_2482cev   A     GAIGUANIDINE E - 256
2cev_A_2482cev   A     MNMANGANESE (II) ION V - 270
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1brm_A_1351brm   A AT1ACTIVE SITE IDENTIFIED FROM MODIFIED CYS.C - 135
1brm_A_1351brm   A AT1ACTIVE SITE IDENTIFIED FROM MODIFIED CYS.Q - 162

Clusters included in this Subclass
CLUSTER: HE.2.30
CLUSTER: HE.3.41
CLUSTER: HE.4.254