Logo
Information on SUBCLASS 2.5.8
Subclass Accession number: 5410
Subclass: 2.5.8 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.7 (>50 %)  1.7.2 (>50 %)  1.7.2.1
GO : GO:0005507 (>75 %)  GO:0016661 (>50 %)  GO:0016662 (>50 %)  GO:0046914 (>75 %)  GO:0050421 (>50 %)  
SCOP : 49502 (>75 %)  49503 (>75 %)  49550 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 39.6 +/- 25.5
Average RMSD (Å) : 0.400 +/- 0.173

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: pXGhXh
(φψ)-conformation: aagpbb
Pattern: [LV][IP][EW]x[FV][ET]x[G][AM][AN][AG]x[FI][KM][V]x
Conservation:0.194-0.8620.013-0.316-0.117-0.185-0.9612.899-0.415-0.6380.557-0.0420.120-0.1851.348-1.410
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j9q_A_3081j9q   A308323LIEAFELGAAAHFKVTHHHHHTSS-EEEEEEEaaaaaaagxbbbbbbx
1nif_*_1421nif   -142157VPWHVTSGMNGAIMVLHHHHHTTT-EEEEEEEaaaaaaavxbbbbbbx
1oe1_A_3021oe1   A302317LIEAFELGAAGHIKVEHHHHHTTS-EEEEEEEaaaaaaagxbbbbxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j9q_A_3081j9q   A     CUCOPPER (II) ION L - 308
1j9q_A_3081j9q   A     NO2NITRITE ION L - 308
1j9q_A_3081j9q   A     NO2NITRITE ION F - 312
1nif_*_1421nif   *     CUCOPPER (II) ION H - 145
1nif_*_1421nif   *     CUCOPPER (II) ION M - 150
1oe1_A_3021oe1   A     PG4TETRAETHYLENE GLYCOL A - 305
1oe1_A_3021oe1   A     PG4TETRAETHYLENE GLYCOL F - 306
1oe1_A_3021oe1   A     PG4TETRAETHYLENE GLYCOL A - 311
1oe1_A_3021oe1   A     PG4TETRAETHYLENE GLYCOL G - 312
1oe1_A_3021oe1   A     PG4TETRAETHYLENE GLYCOL H - 313
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oe1_A_3021oe1   A AC3PG4 BINDING SITE FOR CHAIN AF - 306
1oe1_A_3021oe1   A AC3PG4 BINDING SITE FOR CHAIN AH - 313

Clusters included in this Subclass
CLUSTER: HE.3.282