Information on SUBCLASS 2.6.4 |
Subclass Accession number: 5417
Subclass: 2.6.4 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 8.2 +/- 20.4 Average RMSD (Å) : 0.617 +/- 0.313 Consensus geometry
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Consensus Sequence: | pXXphp |
(φψ)-conformation: | aabpbb |
Pattern: | [acps] | [DEKQS] | [eknr] | [AILM] | [afkt] | [kqr] | [hiv] | [aefk] | [DEKPS] | [GILTV] | [hknr] | x | [AFILV] |
Conservation: | -0.640 | 1.246 | 0.262 | 1.466 | -0.761 | 1.105 | -0.356 | -1.331 | 0.761 | -0.572 | -0.080 | -1.690 | 0.591 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bt4_A_102 | 1bt4 | A | 108 | 120 | LKEAKLIGDTHVA | HHHHHHHS-EEEE | aaaaaaabxbbxa |
1efd_N_110 | 1efd | N | 110 | 122 | PEMLARIAPGRGF | HHHHHHHS-EEEE | aaaaaaabxbbxb |
1gpl_*_84 | 1gpl | - | 90 | 102 | CKNMFQVEKVNCI | HHHHHHH--EEEE | aaaaaaabxbxbb |
1hpl_A_85 | 1hpl | A | 90 | 102 | CQNMFKVESVNCI | HHHHHHH--EEEE | aaaaaaabxbxbb |
1qho_A_235 | 1qho | A | 242 | 254 | ADKLYQKKDIFLV | HHHHHHH---EEE | aaaaaaabxxbbb |
2ak3_A_18 | 2ak3 | A | 22 | 34 | SSRITKHFELKHL | HHHHHHHB--EEE | aaaaaaabxbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bt4_A_102 | 1bt4 | A | PLPPYRIDOXAL-5'-PHOSPHATE | W - 103 |
2ak3_A_18 | 2ak3 | A | AMPADENOSINE MONOPHOSPHATE | K - 18 |
2ak3_A_18 | 2ak3 | A | AMPADENOSINE MONOPHOSPHATE | S - 35 |
Clusters included in this Subclass |
CLUSTER: HE.1.62 |
CLUSTER: HE.3.102 |