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Information on SUBCLASS 2.4.4
Subclass Accession number: 543
Subclass: 2.4.4 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004190 (>75 %)  
SCOP : 50629 (>75 %)  50630 (>75 %)  
 Number of loops: 16

Average sequence ID (%) : 27.1 +/- 23.3
Average RMSD (Å) : 0.431 +/- 0.087

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XGpcXX
(φψ)-conformation: aellbb
Pattern: x[gw][dehknsy][GNQS]xx
Conservation:-0.7981.517-0.3030.987-0.629-0.775
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a3a_A_561a3a   A5762LGESIAEETTEEaelvbb
1a6j_A_641a6j   A6570IGNGIAEETTEEaelvbb
1a6q_*_91a6q   -1823QGNGLREETTEEbelvbb
1d2e_A_2891d2e   A293298LGHSKNEETTEEbellbb
1ekg_A_1241ekg   A127132FGSGVLEETTEEbelvbb
1gwy_A_1461gwy   A151156LGYGLREETTEEaelvbb
1i1n_A_501i1n   A5257IGFQATEETTEEaelvbb
1i7p_A_1481i7p   A151156QGKGKFEETTEEaelvxb
1j58_A_2931j58   A295300ASDGHAEETTEEaelvbb
1k3i_A_5941k3i   A597602NGGNSYEETTEEaevvbb
1olr_A_111olr   A1318SGNGYEEETTEEbelvbb
1pgu_A_3011pgu   A307312TGNGRIEETTEEaelvxb
1pzx_A_291pzx   A3136HWNGQDEETTEEbelvbb
1q16_A_9111q16   A912917GGKGIAEETTEEeelvbb
1un7_A_661un7   A6671GGYGADEETTEEbelvbb
1usc_A_1611usc   A163168YGKGLYEETTEEaelvbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i1n_A_501i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 52
1i1n_A_501i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 54
1i1n_A_501i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Q - 55
1i1n_A_501i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE A - 56
1i1n_A_501i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 57
1i1n_A_501i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 58
1j58_A_2931j58   A     MSESELENOMETHIONINE V - 293
1j58_A_2931j58   A     MSESELENOMETHIONINE F - 294
1j58_A_2931j58   A     MSESELENOMETHIONINE A - 295
1j58_A_2931j58   A     MSESELENOMETHIONINE S - 296
1j58_A_2931j58   A     MSESELENOMETHIONINE H - 299
1j58_A_2931j58   A     MSESELENOMETHIONINE R - 301
1pzx_A_291pzx   A     PLMPALMITIC ACID V - 29
1usc_A_1611usc   A     FMNFLAVIN MONONUCLEOTIDE Y - 162
1usc_A_1611usc   A     ACTACETATE ION Y - 162
1usc_A_1611usc   A     FMNFLAVIN MONONUCLEOTIDE Y - 168
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1usc_A_1611usc   A AC1FMN BINDING SITE FOR CHAIN AY - 162

Clusters included in this Subclass
CLUSTER: HA.1.16