Information on SUBCLASS 3.1.5 |
Subclass Accession number: 5454
Subclass: 3.1.5 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 16.2 +/- 16.1 Average RMSD (Å) : 0.580 +/- 0.249 Consensus geometry
|
Consensus Sequence: | XXchXXh |
(φψ)-conformation: | aagpabb |
Pattern: | [AS] | x | x | x | x | [ael] | x | x | [AFV] | [DEGP] | x | [ILV] | [ikt] |
Conservation: | 1.828 | -0.825 | -1.497 | -0.044 | -0.589 | -0.520 | -0.481 | 1.152 | -0.036 | 0.215 | -0.302 | 1.736 | -0.637 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d2n_A_557 | 1d2n | A | 562 | 574 | AKIAEESNFPFIK | HHHHHHHT-SEEE | aaaaaaavxabbb |
1jw9_B_41 | 1jw9 | B | 47 | 59 | SQYLASAGVGNLT | HHHHHHHT-SEEE | aaaaaaagxabbb |
1ne2_A_61 | 1ne2 | A | 63 | 75 | ACGSYLLGAESVT | HHHHHHTTBSEEE | aaaaaaavxabbb |
1qyi_A_351 | 1qyi | A | 351 | 363 | AGELEAHHADYVI | HHHHHHTT-SEEE | aaaaaaalxabbb |
1vhh_*_159 | 1vhh | - | 163 | 175 | ARLAVEAGFDWVY | HHHHHHTT-SEEE | aaaaaaagxabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d2n_A_557 | 1d2n | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | K - 557 |
1d2n_A_557 | 1d2n | A | MGMAGNESIUM ION | K - 557 |
1d2n_A_557 | 1d2n | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | T - 558 |
1d2n_A_557 | 1d2n | A | MGMAGNESIUM ION | T - 558 |
1d2n_A_557 | 1d2n | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | A - 559 |
1d2n_A_557 | 1d2n | A | MGMAGNESIUM ION | A - 559 |
1d2n_A_557 | 1d2n | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | L - 560 |
1ne2_A_61 | 1ne2 | A | MSESELENOMETHIONINE | L - 62 |
1ne2_A_61 | 1ne2 | A | MSESELENOMETHIONINE | A - 71 |
1ne2_A_61 | 1ne2 | A | MSESELENOMETHIONINE | E - 72 |
1ne2_A_61 | 1ne2 | A | MSESELENOMETHIONINE | S - 73 |
1ne2_A_61 | 1ne2 | A | MSESELENOMETHIONINE | T - 75 |
1ne2_A_61 | 1ne2 | A | MSESELENOMETHIONINE | A - 76 |
1ne2_A_61 | 1ne2 | A | MSESELENOMETHIONINE | F - 77 |
1vhh_*_159 | 1vhh | * | ZNZINC ION | E - 177 |
Clusters included in this Subclass |
CLUSTER: HE.3.134 |