Information on SUBCLASS 2.4.7 |
Subclass Accession number: 546
Subclass: 2.4.7 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0003677 (>50 %) |
Number of loops: 6 Average sequence ID (%) : 10.0 +/- 10.1 Average RMSD (Å) : 0.567 +/- 0.273 Consensus geometry
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Consensus Sequence: | phpGXX |
(φψ)-conformation: | bbllbb |
Pattern: | [KSTY] | [ael] | [CENST] | [flvy] | [DEGNS] | [GN] | [cnqrs] | x | [hiwy] | x | [AILVY] | [agilt] | x | [apsv] |
Conservation: | 0.039 | -0.334 | 0.120 | -0.085 | 0.522 | 3.172 | -0.742 | -0.386 | -0.003 | -0.670 | 0.303 | -0.814 | -0.573 | -0.549 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8d_*_331 | 1a8d | - | 336 | 349 | YVSYNNNEHIVGYP | EEEETTEEEEEEEE | bbbbllbxbxxbbx |
1cvl_*_196 | 1cvl | - | 196 | 209 | TETVGGSQHLLYSW | EEEETTEEEEEEEE | bbbbvvbxbxbbbb |
1f5a_A_156 | 1f5a | A | 158 | 171 | KLCFDGIEIDILFA | EEEETTEEEEEEEE | bbbbvvbxbbbxbb |
1g3p_*_30 | 1g3p | - | 30 | 43 | YANYEGCLWNATGV | EEEETTEEEEEEEE | bbxblvbxbbxbex |
1s18_A_287 | 1s18 | A | 293 | 306 | SEEDSGRVASYIMA | EEEETTEEEEEEEE | bbbblvxbbbbbbb |
1uuz_A_44 | 1uuz | A | 45 | 58 | SLSLEGQPYVLANS | EEEETTEEEEEEEE | bbbblvbwbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f5a_A_156 | 1f5a | A | 3AT3'-DEOXYADENOSINE-5'-TRIPHOSPHATE | V - 156 |
1f5a_A_156 | 1f5a | A | MNMANGANESE (II) ION | K - 158 |
1f5a_A_156 | 1f5a | A | 3AT3'-DEOXYADENOSINE-5'-TRIPHOSPHATE | K - 158 |
1f5a_A_156 | 1f5a | A | 3POTRIPHOSPATE | K - 158 |
1f5a_A_156 | 1f5a | A | 3POTRIPHOSPATE | E - 165 |
1f5a_A_156 | 1f5a | A | MNMANGANESE (II) ION | D - 167 |
1f5a_A_156 | 1f5a | A | 3AT3'-DEOXYADENOSINE-5'-TRIPHOSPHATE | D - 167 |
1f5a_A_156 | 1f5a | A | 3POTRIPHOSPATE | D - 167 |
1f5a_A_156 | 1f5a | A | 3AT3'-DEOXYADENOSINE-5'-TRIPHOSPHATE | L - 169 |
1g3p_*_30 | 1g3p | * | TRO2-HYDROXY-TRYPTOPHAN | Y - 30 |
1g3p_*_30 | 1g3p | * | TRO2-HYDROXY-TRYPTOPHAN | A - 31 |
1g3p_*_30 | 1g3p | * | TRO2-HYDROXY-TRYPTOPHAN | N - 32 |
1g3p_*_30 | 1g3p | * | TRO2-HYDROXY-TRYPTOPHAN | L - 37 |
Clusters included in this Subclass |
CLUSTER: HA.2.42 |