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Information on SUBCLASS 3.2.10
Subclass Accession number: 5467
Subclass: 3.2.10 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 13.3 +/- 17.5
Average RMSD (Å) : 0.867 +/- 0.197

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXchXhX
(φψ)-conformation: aalbpbb
Pattern: [aiklt]x[AKNT]x[IKLV][acfmv][AEQ]x[flmtv][dgn][flv][KPT][AFM][fgk][AFGY][agivy][adk]
Conservation:-1.200-0.6900.275-0.2430.458-0.9261.641-0.481-0.3341.4420.3461.8220.695-0.8440.314-1.609-0.665
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c1d_A_491c1d   A6278AMTLKMAVSNLPMGGGKHHHHHHHHTT-S-EEEEaaaaaaaaalbwbxbbb
1hwx_A_1011hwx   A110126LMTYKCAVVDVPFGGAKHHHHHHHHTT---EEEEaaaaaaaaalbxbxxbb
1j1u_A_791j1u   A88104YNKKVFEAMGLKAKYVYHHHHHHHHTT---EEEEaaaaaaaaavbxbxxbx
1p77_A_161p77   A1935IQNKLAAQTHQTMEYIAHHHHHHHHTT--EEEEEaaaaaaaaalbxbbbbb
1qna_A_871qna   A96112KYARIVQKLGFPAKFKDHHHHHHHHTT-----EEaaaaaaaaavbwxbbxl
1ub7_A_891ub7   A89105TAALVQARFGLKAFAYDHHHHHHHHTT---EEEEaaaaaaaaalxxbxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c1d_A_491c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 59
1c1d_A_491c1d   A     PHEPHENYLALANINE M - 63
1c1d_A_491c1d   A     PHEPHENYLALANINE K - 66
1c1d_A_491c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 66
1c1d_A_491c1d   A     PHEPHENYLALANINE M - 67
1c1d_A_491c1d   A     PHEPHENYLALANINE K - 78
1c1d_A_491c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 78
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE L - 107
1hwx_A_1011hwx   A     GLUGLUTAMIC ACID M - 111
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE T - 112
1hwx_A_1011hwx   A     GLUGLUTAMIC ACID K - 114
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE K - 114
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE C - 115
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE A - 116
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE V - 118
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE D - 119
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE V - 120
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE P - 121
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE F - 122
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE G - 123
1hwx_A_1011hwx   A     GLUGLUTAMIC ACID A - 125
1hwx_A_1011hwx   A     GLUGLUTAMIC ACID K - 126
1hwx_A_1011hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE K - 126
1p77_A_161p77   A     ACTACETATE ION T - 30
1ub7_A_891ub7   A     GOLGLYCEROL F - 102

Clusters included in this Subclass
CLUSTER: HE.4.152
CLUSTER: HE.6.196