Information on SUBCLASS 3.2.15 |
Subclass Accession number: 5472
Subclass: 3.2.15 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>50 %) GO : GO:0008168 (>50 %) GO:0008757 (>50 %) GO:0016741 (>50 %) SCOP : 53334 (>50 %) 53335 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 7.7 +/- 10.8 Average RMSD (Å) : 0.500 +/- 0.100 Consensus geometry
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Consensus Sequence: | ppchphX |
(φψ)-conformation: | aalbpbb |
Pattern: | [ADN] | [ALV] | [AEK] | [KRT] | [KNY] | [DG] | [IV] | [ENR] | [APV] | x | [FGV] | [IL] | [ERT] |
Conservation: | -0.510 | -0.284 | -0.284 | 0.055 | -0.510 | 1.284 | 1.970 | 0.168 | -0.623 | -0.963 | -1.415 | 1.509 | -0.397 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1kpg_A_82 | 1kpg | A | 82 | 94 | AVEKYDVNVVGLT | HHHHH---EEEEE | aaaaalbxbbbbb |
1nh8_A_117 | 1nh8 | A | 123 | 135 | DLATKGIEATVIR | HHHHHT---EEEE | aaaaavbxbbxbx |
1ufk_A_155 | 1ufk | A | 161 | 173 | NAKRNGVRPRFLE | HHHHTT---EEEE | aaaaavbbxxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | A - 82 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | V - 83 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | E - 84 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | K - 85 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | D - 87 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | V - 88 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | N - 89 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | V - 90 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | V - 91 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | G - 92 |
1kpg_A_82 | 1kpg | A | MSESELENOMETHIONINE | L - 93 |
1kpg_A_82 | 1kpg | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | L - 93 |
1kpg_A_82 | 1kpg | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | T - 94 |
Clusters included in this Subclass |
CLUSTER: HE.4.297 |