Information on SUBCLASS 3.3.7 |
Subclass Accession number: 5482
Subclass: 3.3.7 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0016788 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 13.0 +/- 12.3 Average RMSD (Å) : 0.880 +/- 0.130 Consensus geometry
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Consensus Sequence: | phXhcXh |
(φψ)-conformation: | aalpabb |
Pattern: | [GILWY] | [gkl] | x | [FIV] | [EHKR] | x | x | [ACKL] | x | [ekqs] | [AFIW] | x | x | [DKT] | x | x | [IT] | [IMTV] | [GIPV] | x |
Conservation: | -0.844 | -0.620 | -1.070 | 1.730 | 1.130 | -0.890 | 0.231 | -0.467 | 0.034 | -0.258 | 0.197 | 1.012 | -1.205 | 1.348 | -0.890 | -0.435 | 1.795 | 1.038 | -0.741 | -1.094 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b5t_A_188 | 1b5t | A | 191 | 210 | YLRFRDRCVSAGIDVEIIPG | HHHHHHHHHHTT--S-EEEE | aaaaaaaaaaavxabxxxxx |
1k4k_A_17 | 1k4k | A | 20 | 39 | LKPVETLANLIGLTRVTIIP | HHHHHHHHHHH----EEEEE | aaaaaaaaaaavxabbbxbx |
1lar_A_1787 | 1lar | A | 1793 | 1812 | IGQVHKTKEQFGQDGPITVH | HHHHHHHHHHTT--S-EEEE | aaaaaaaaaaalxaxxxxbb |
1nnl_A_157 | 1nnl | A | 159 | 178 | GKVIKLLKEKFHFKKIIMIG | HHHHHHHHHHH--S-EEEEE | aaaaaaaaaaalpabbbbbb |
1nu0_A_42 | 1nu0 | A | 42 | 61 | WNIIERLLKEWQPDEIIVGL | HHHHHHHHHHH--S-EEEEE | aaaaaaaaaaalxabbbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1k4k_A_17 | 1k4k | A | XEXENON | H - 19 |
1k4k_A_17 | 1k4k | A | XEXENON | L - 20 |
1k4k_A_17 | 1k4k | A | XEXENON | I - 37 |
1k4k_A_17 | 1k4k | A | XEXENON | I - 38 |
1nnl_A_157 | 1nnl | A | CACALCIUM ION | K - 158 |
1nnl_A_157 | 1nnl | A | CACALCIUM ION | G - 178 |
1nu0_A_42 | 1nu0 | A | MSESELENOMETHIONINE | I - 45 |
1nu0_A_42 | 1nu0 | A | MSESELENOMETHIONINE | L - 48 |
1nu0_A_42 | 1nu0 | A | MSESELENOMETHIONINE | L - 49 |
1nu0_A_42 | 1nu0 | A | MSESELENOMETHIONINE | W - 52 |
1nu0_A_42 | 1nu0 | A | MSESELENOMETHIONINE | Q - 53 |
1nu0_A_42 | 1nu0 | A | MSESELENOMETHIONINE | P - 54 |
1nu0_A_42 | 1nu0 | A | MSESELENOMETHIONINE | D - 55 |
1nu0_A_42 | 1nu0 | A | MSESELENOMETHIONINE | E - 56 |
1nu0_A_42 | 1nu0 | A | MSESELENOMETHIONINE | I - 57 |
1nu0_A_42 | 1nu0 | A | MSESELENOMETHIONINE | I - 58 |
1nu0_A_42 | 1nu0 | A | MSESELENOMETHIONINE | V - 59 |
1nu0_A_42 | 1nu0 | A | MSESELENOMETHIONINE | L - 63 |
Clusters included in this Subclass |
CLUSTER: HE.5.111 |