Logo
Information on SUBCLASS 2.4.10
Subclass Accession number: 549
Subclass: 2.4.10 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>75 %)  3.2.1 (>75 %)  3.2.1.83.4 (>75 %)  3.4.21 (>75 %)  
GO : GO:0004175 (>75 %)  GO:0004252 (>75 %)  GO:0004553 (>75 %)  GO:0008233 (>75 %)  GO:0008236 (>75 %)  GO:0016798 (>75 %)  
SCOP : 49898 (>75 %)  49899 (>75 %)  49978 (>75 %)  50493 (>75 %)  50494 (>75 %)  50514 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 30.0 +/- 25.6
Average RMSD (Å) : 0.620 +/- 0.249

Consensus geometry
d (Å): 7 delta (°): 135-180 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: pXXGXX
(φψ)-conformation: bbllbp
Pattern: [AST][AIV][QRSY]x[GNQ][G][agr]x[flvw][CG][GT][FG][ASV][AL]xx
Conservation:0.2520.237-0.529-1.107-0.0722.774-0.703-0.979-0.9781.3750.6100.399-0.2420.170-0.475-0.732
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a7s_*_151a7s   -1732SIQNQGRHFCGGALIHEEEETTEEEEEEEEEEbbbblvxxabbbbxab
1bio_*_301bio   -3247SVQLNGAHLCGGVLVAEEEETTEEEEEEEEEEbxbblvbpabxbbxab
1gdn_A_301gdn   A3247SISRNGGPWCGGSLLNEEEETTEEEEEEEEEExbxblvbxIaebbxab
1gvz_A_301gvz   A3247AVYHQGHFQCGGVLVHEEEETTEEEEEEEEEEbbbblvbxabxebxab
1ssx_A_621ssx   A6277TARIGGAVVGTFAARVEEEETTEEEEEEEEEExxbbvvbxaebxabMp
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a7s_*_151a7s   *     EOHETHANOL L - 15
1a7s_*_151a7s   *     EOHETHANOL Q - 19
1a7s_*_151a7s   *     EOHETHANOL Q - 21
1a7s_*_151a7s   *     EOHETHANOL G - 22
1a7s_*_151a7s   *     EOHETHANOL R - 23
1gdn_A_301gdn   A     GOLGLYCEROL I - 30
1gdn_A_301gdn   A     GOLGLYCEROL V - 31
1gvz_A_301gvz   A     GOLGLYCEROL A - 32
1gvz_A_301gvz   A     GOLGLYCEROL Y - 34
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gvz_A_301gvz   A AC3GOL BINDING SITE FOR CHAIN AY - 34

Clusters included in this Subclass
CLUSTER: HA.2.43