ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 3.4.9

Subclass Accession number: 5495
Subclass: 3.4.9

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
GO : GO:0003862 (>50 %) GO:0016614 (>50 %) GO:0016616 (>50 %) GO:0016874 (>50 %) GO:0016886 (>50 %)
SCOP : 53658 (>50 %) 53659 (>50 %) 53660 (>50 %)

Number of loops: 3

Average sequence ID (%) : 24.0 +/- 25.2
Average RMSD (Å) : 0.833 +/- 0.321

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 135-180

Consensus Sequence:	pXpXchX
(φψ)-conformation:	aabaabb

Pattern:	[DE]	x	[GT]	[EKR]	[FKL]	[AW]	x	[EKL]	x	[AV]	[EKT]	[E]	[KV]	[AGT]	[KR]	x	[NY]	[PT]	[DG]	[LV]	[ART]	[L]	x	[FH]	x
Conservation:	1.342	-1.047	-0.082	0.216	-1.227	0.885	-0.867	-1.137	-0.957	0.010	-0.506	2.381	-0.639	-0.686	1.212	-0.596	0.367	0.627	0.465	0.400	-0.776	1.569	-1.227	1.049	-0.776

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a05_A_195	1a05	A	195	219	ETTRLWREVVTEVARDYPDVRLSHM	HHHHHHHHHHHHHGGG-TTSEEEEE	aaaaaaaaaaaaaaaabaabxxbbb
1f75_A_121	1f75	A	121	145	DHTKKAVLEAKEKTKHNTGLTLVFA	HHHHHHHHHHHHTTTT--S-EEEEE	aaaaaaaaaaaaaaaaxaFxbxbbx
1xaa_*_190	1xaa	-	190	214	EVGEFWRKTVEEVGRGYPDVALEHQ	HHHHHHHHHHHHHHTT-TTSEEEEE	aaaaaaaaaaaaaaaabaabxbbbb

Clusters included in this Subclass