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Information on SUBCLASS 3.4.12
Subclass Accession number: 5498
Subclass: 3.4.12 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 11.7 +/- 11.5
Average RMSD (Å) : 0.833 +/- 0.208

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXXchX
(φψ)-conformation: aabaabb
Pattern: [HPR][EGN][AMV][GKR][AE]x[CLV][HN][AGR]x[AL][GKL][HP]x[EKP][GN][FIV]x[LP][CIY]
Conservation:-0.244-0.133-0.133-0.2440.296-1.2450.0902.402-0.578-0.6250.181-1.6901.780-1.0220.0901.7330.423-0.466-0.371-0.244
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f6d_A_2491f6d   A249268PNVREPVNRILGHVKNVILIHHHHHHHHHHHTT-TTEEEEaaaaaaaaaaaaaxaabbxb
1itz_A_4231itz   A424443HGMGAICNGIALHSPGFVPYHHHHHHHHHHHTT-TT-EEEaaaaaaaaaaaaabaaxbxb
1jy1_A_2321jy1   A232251REAKAHLHAQAKPYENISLCHHHHHHHHHHHTT-TTEEEEeaaaaaaaaaaaabaabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1itz_A_4231itz   A     TPPTHIAMINE DIPHOSPHATE E - 423
1itz_A_4231itz   A     TPPTHIAMINE DIPHOSPHATE T - 446
1itz_A_4231itz   A     TPPTHIAMINE DIPHOSPHATE F - 447

Clusters included in this Subclass
CLUSTER: HE.6.220