Information on SUBCLASS 3.4.12 |
Subclass Accession number: 5498
Subclass: 3.4.12 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 11.7 +/- 11.5 Average RMSD (Å) : 0.833 +/- 0.208 Consensus geometry
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Consensus Sequence: | XXXXchX |
(φψ)-conformation: | aabaabb |
Pattern: | [HPR] | [EGN] | [AMV] | [GKR] | [AE] | x | [CLV] | [HN] | [AGR] | x | [AL] | [GKL] | [HP] | x | [EKP] | [GN] | [FIV] | x | [LP] | [CIY] |
Conservation: | -0.244 | -0.133 | -0.133 | -0.244 | 0.296 | -1.245 | 0.090 | 2.402 | -0.578 | -0.625 | 0.181 | -1.690 | 1.780 | -1.022 | 0.090 | 1.733 | 0.423 | -0.466 | -0.371 | -0.244 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f6d_A_249 | 1f6d | A | 249 | 268 | PNVREPVNRILGHVKNVILI | HHHHHHHHHHHTT-TTEEEE | aaaaaaaaaaaaaxaabbxb |
1itz_A_423 | 1itz | A | 424 | 443 | HGMGAICNGIALHSPGFVPY | HHHHHHHHHHHTT-TT-EEE | aaaaaaaaaaaaabaaxbxb |
1jy1_A_232 | 1jy1 | A | 232 | 251 | REAKAHLHAQAKPYENISLC | HHHHHHHHHHHTT-TTEEEE | eaaaaaaaaaaaabaabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1itz_A_423 | 1itz | A | TPPTHIAMINE DIPHOSPHATE | E - 423 |
1itz_A_423 | 1itz | A | TPPTHIAMINE DIPHOSPHATE | T - 446 |
1itz_A_423 | 1itz | A | TPPTHIAMINE DIPHOSPHATE | F - 447 |
Clusters included in this Subclass |
CLUSTER: HE.6.220 |