Logo
Information on SUBCLASS 3.5.5
Subclass Accession number: 5505
Subclass: 3.5.5 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 21.8 +/- 33.1
Average RMSD (Å) : 0.517 +/- 0.098

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XhXXXhX
(φψ)-conformation: aalppbb
Pattern: x[AFT][AW][dky][acl][DGR]x[EKPQ][ILVY][et]x
Conservation:-0.924-0.1711.739-1.670-0.9030.117-0.4181.1310.9810.219-0.101
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ddz_A_2701ddz   A274284DAWDAGQELTVHHHHTT---EEaaaaavxxbxb
1ddz_A_5241ddz   A528538DAWDAGQELEVHHHHTT---EEaaaaavxxbbb
1hss_A_951hss   A95104ITAVCRLPIV.HHHHTT--EE.aaaaalbxbb.
1i6p_A_1621i6p   A166176SAWKRGQKVTIHHHHTT---EEaaaaavxxbbb
1iyh_A_161iyh   A2131IFAYLDIQYEDHHHHTT---EEaaaaalbxbxx
1pd2_1_161pd2   12131IFAYLDIKYEDHHHHTT---EEaaaaalxxbxx

Clusters included in this Subclass
CLUSTER: HE.5.236
CLUSTER: HE.6.109