Information on SUBCLASS 2.4.14 |
Subclass Accession number: 553
Subclass: 2.4.14 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 16.7 +/- 14.2 Average RMSD (Å) : 0.233 +/- 0.115 Consensus geometry
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Consensus Sequence: | pppGpX |
(φψ)-conformation: | bbllbb |
Pattern: | [NTY] | [DHK] | [KNQ] | [G] | [HKT] | [FKL] |
Conservation: | -0.463 | -0.297 | -0.019 | 1.983 | -0.463 | -0.741 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e9g_A_72 | 1e9g | A | 72 | 77 | TKKGKL | EETTEE | bblvxb |
1gvz_A_30 | 1gvz | A | 34 | 39 | YHQGHF | EETTEE | bblvbx |
1oac_A_339 | 1oac | A | 348 | 353 | NDNGTK | EETTEE | xxlvbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e9g_A_72 | 1e9g | A | MNMANGANESE (II) ION | K - 73 |
1e9g_A_72 | 1e9g | A | PO4PHOSPHATE ION | K - 73 |
1gvz_A_30 | 1gvz | A | GOLGLYCEROL | A - 32 |
1gvz_A_30 | 1gvz | A | GOLGLYCEROL | Y - 34 |
1oac_A_339 | 1oac | A | CACALCIUM ION | Y - 358 |
1oac_A_339 | 1oac | A | TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE | V - 367 |
1oac_A_339 | 1oac | A | CUCOPPER (II) ION | V - 367 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gvz_A_30 | 1gvz | A | AC3GOL BINDING SITE FOR CHAIN A | Y - 34 |
Clusters included in this Subclass |
CLUSTER: HA.1.99 |