Information on SUBCLASS 3.10.4 |
Subclass Accession number: 5532
Subclass: 3.10.4 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 13.8 +/- 15.8 Average RMSD (Å) : 0.600 +/- 0.187 Consensus geometry
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Consensus Sequence: | XpXXXXp |
(φψ)-conformation: | aapplbb |
Pattern: | [hknq] | [ADKS] | x | [LV] | [krs] | [asv] | [ilm] | [egs] | [DNQS] | [ilt] | [DPS] | [EGNR] | x | x | [ILPV] | [ILMTV] |
Conservation: | -0.993 | -0.270 | -0.885 | 2.468 | -0.429 | -0.353 | 0.296 | -1.155 | 0.724 | -0.906 | 1.717 | -0.067 | 0.073 | -0.848 | 0.071 | 0.557 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b7g_O_233 | 1b7g | O | 234 | 249 | KDILSVLENTPRIVLI | HHHHHHHHT-TTEEEE | aaaaaaaaabpvbbbb |
1cbk_A_15 | 1cbk | A | 20 | 35 | HAALKAISQLSNTHLV | HHHHHHHHTSTTEEEE | aaaaaaaaaxxlbbxa |
1cjc_A_207 | 1cjc | A | 207 | 222 | IKELREMIQLPGTRPM | HHHHHHHHT-TTEEEE | aaaaaaaaaxpvbbxb |
1ez0_A_325 | 1ez0 | A | 332 | 347 | QSQVVSRGSDDGIDVT | HHHHHHHHTSTTEEEE | aaaaaaaaaxxvbbbb |
1f9y_A_14 | 1f9y | A | 19 | 34 | NAALKALGDIPESHIL | HHHHHHHHTSTTEEEE | aaaaaaaaaxxlbbxa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cjc_A_207 | 1cjc | A | FADFLAVIN-ADENINE DINUCLEOTIDE | K - 208 |
1cjc_A_207 | 1cjc | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 209 |
1ez0_A_325 | 1ez0 | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | I - 327 |
1f9y_A_14 | 1f9y | A | ACTACETATE ION | P - 29 |
1f9y_A_14 | 1f9y | A | ACTACETATE ION | E - 30 |
1f9y_A_14 | 1f9y | A | ACTACETATE ION | S - 31 |
1f9y_A_14 | 1f9y | A | ACTACETATE ION | H - 32 |
Clusters included in this Subclass |
CLUSTER: HE.3.177 |
CLUSTER: HE.4.326 |