Information on SUBCLASS 3.11.2 |
Subclass Accession number: 5535
Subclass: 3.11.2 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 15.3 +/- 15.3 Average RMSD (Å) : 0.700 +/- 0.245 Consensus geometry
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Consensus Sequence: | Xhcpchp |
(φψ)-conformation: | aaeaabb |
Pattern: | x | [AKRS] | x | [FL] | [cekq] | [ADEG] | x | [FILVY] | [GKQ] | [DENP] | [ADG] | [iv] | [KNPR] | [ipv] | x |
Conservation: | -1.325 | 0.121 | -0.838 | 2.177 | -1.420 | -0.113 | -0.987 | 0.402 | 0.641 | 0.841 | 0.377 | 0.730 | 0.265 | -0.872 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g62_A_32 | 1g62 | A | 35 | 49 | YSAFEAELGDAIPIV | HHHHHHHHTTTS-EE | aaaaaaaaeaabpbx |
1nxj_A_8 | 1nxj | A | 8 | 21 | TADLVDDIGPDVRS. | HHHHHHHH-TT-EE. | aaaaaaaaeaapxb. |
1o58_A_169 | 1o58 | A | 175 | 189 | GRVLKGFFGNGVKIV | HHHHHHHHGGGSEEE | aaaaaaaaeaabbbb |
1p99_A_262 | 1p99 | A | 265 | 278 | QKALQEDVKDGEKP. | HHHHHHHHTTSSEE. | aaaaaaaaeaabbx. |
1q5x_A_5 | 1q5x | A | 5 | 18 | TSELCDIYQEDVNV. | HHHHHHHHGGGSEE. | aaaaaaaaeaabbb. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1o58_A_169 | 1o58 | A | PO4PHOSPHATE ION | G - 169 |
1o58_A_169 | 1o58 | A | PO4PHOSPHATE ION | T - 170 |
1o58_A_169 | 1o58 | A | PO4PHOSPHATE ION | I - 171 |
1p99_A_262 | 1p99 | A | GLYGLYCINE | E - 276 |
1p99_A_262 | 1p99 | A | METMETHIONINE | E - 276 |
Clusters included in this Subclass |
CLUSTER: HE.4.341 |
CLUSTER: HE.5.264 |