Information on SUBCLASS 3.16.4 |
Subclass Accession number: 5554
Subclass: 3.16.4 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 11.9 Average RMSD (Å) : 1.000 +/- 0.300 Consensus geometry
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Consensus Sequence: | XppXXXX |
(φψ)-conformation: | aapapbb |
Pattern: | [AKL] | x | [N] | x | [DEY] | [ASV] | x | x | x | [FIL] | x | [KR] | [HS] | x | [AFK] | [ATV] | [KLV] | [CI] |
Conservation: | -0.591 | -0.521 | 2.874 | -0.804 | -0.096 | -0.238 | -0.521 | -1.016 | -0.379 | 0.328 | -0.521 | 1.380 | 0.465 | -0.662 | -0.733 | -0.026 | -0.450 | 1.510 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hnu_A_94 | 1hnu | A | 99 | 116 | ARNVYVTDAFIKHSKVLI | HHHHHHHHHHHH--SEEE | aaaaaaaaaaaapaxxxb |
1nm8_A_249 | 1nm8 | A | 249 | 266 | KVNRDSVRSIQKSIFTVC | HHHHHHHHHHHHSS-EEE | aaaaaaaaaaaapabbbb |
2hgs_A_277 | 2hgs | A | 277 | 294 | LQNWEARLLLERSHAAKC | HHHHHHHHHHHHSSSEEE | aaaaaaaaaaaaxaxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hnu_A_94 | 1hnu | A | REOPERRHENATE | F - 97 |
1hnu_A_94 | 1hnu | A | REOPERRHENATE | N - 101 |
1hnu_A_94 | 1hnu | A | EDO1,2-ETHANEDIOL | F - 108 |
1hnu_A_94 | 1hnu | A | EDO1,2-ETHANEDIOL | I - 109 |
Clusters included in this Subclass |
CLUSTER: HE.2.91 |