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Information on SUBCLASS 3.19.1
Subclass Accession number: 5560
Subclass: 3.19.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 22.4 +/- 22.7
Average RMSD (Å) : 0.800 +/- 0.292

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXhXGpX
(φψ)-conformation: aappebb
Pattern: xxx[AFILVY]x[agil][AFLPW]x[aclmw][ailtv][afly]x[G][kltv][gptv][afiltv][ILV]
Conservation:-0.354-0.632-0.571-0.068-0.265-0.525-0.405-0.619-0.356-0.088-0.110-0.6563.429-0.019-0.1860.0531.370
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ejd_A_1631ejd   A166182TVTIMSAATLAEGTTIIHHHHHHHHTTSBSEEEEaaaaaaaaaaxxexbbb
1ejd_A_3071ejd   A307323QAQFTLLNLVAEGTGVIHHHHHHHHHTSBSEEEEaaaaaaaaaaxxebbbb
1ejd_A_3701ejd   A373389SASLVLAGCIAEGTTVVHHHHHHHHHHSBEEEEEaaaaaaaaaaxxebbbx
1g6s_A_221g6s   A2541SNRALLLAALAHGKTVLHHHHHHHHHHSBSEEEEaaaaaaaaaaxxexbbb
1ji1_A_4841ji1   A487503TYLALIFQMTYVGTPTIHHHHHHHHTTSSSEEEEaaaaaaaaaaxxexwbx
1ji2_A_4331ji2   A436452FRLAVLFQMTYLGTPLIHHHHHHHHHHSSSEEEEaaaaaaaaaaxxexwbx
1m7x_A_5431m7x   A550566LRAYYGWMWAFPGKKLLHHHHHHHHHHSSSEEEEaaaaaaaaaaxpexbbb
1n5d_A_151n5d   A1834FAIVRDLCRQFAGDVVLHHHHHHHHHH-SSEEEEaaaaaaaaaaxxexbbx
1oyw_A_501oyw   A5470SLCYQIPALLLNGLTVVHHHHHHHHHHSSSEEEEaaaaaaaaaabxebbbb
1pam_A_3391pam   A342358LEQALAFTLTSRGVPAIHHHHHHHHHHSSSEEEEaaaaaaaaaaxxebwbb
1qho_A_3401qho   A343359LHQALAFILTSRGTPSIHHHHHHHHHHSSSEEEEaaaaaaaaaaxxebwbb
1uae_*_3071uae   -307323QAQFTLLNLVAEGTGFIHHHHHHHHHHSBSEEEEaaaaaaaaaaxxebbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ejd_A_1631ejd   A     PO4PHOSPHATE ION V - 163
1ejd_A_1631ejd   A     PO4PHOSPHATE ION G - 164
1ejd_A_1631ejd   A     PO4PHOSPHATE ION A - 165
1ejd_A_3701ejd   A     PO4PHOSPHATE ION L - 370
1g6s_A_221g6s   A     S3PSHIKIMATE-3-PHOSPHATE K - 22
1g6s_A_221g6s   A     GPJGLYPHOSATE K - 22
1g6s_A_221g6s   A     S3PSHIKIMATE-3-PHOSPHATE S - 23
1g6s_A_221g6s   A     S3PSHIKIMATE-3-PHOSPHATE V - 24
1g6s_A_221g6s   A     S3PSHIKIMATE-3-PHOSPHATE R - 27
1n5d_A_151n5d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 15
1n5d_A_151n5d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 16
1n5d_A_151n5d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 17
1n5d_A_151n5d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 36
1oyw_A_501oyw   A     MSESELENOMETHIONINE G - 50
1oyw_A_501oyw   A     MSESELENOMETHIONINE G - 52
1oyw_A_501oyw   A     MSESELENOMETHIONINE K - 53
1oyw_A_501oyw   A     MSESELENOMETHIONINE C - 56
1oyw_A_501oyw   A     MSESELENOMETHIONINE Y - 57
1oyw_A_501oyw   A     MSESELENOMETHIONINE P - 60
1oyw_A_501oyw   A     MSESELENOMETHIONINE N - 65
1oyw_A_501oyw   A     MSESELENOMETHIONINE G - 66
1oyw_A_501oyw   A     MSESELENOMETHIONINE L - 67

Clusters included in this Subclass
CLUSTER: HE.3.90
CLUSTER: HE.4.141
CLUSTER: HE.5.278