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Information on SUBCLASS 3.39.1
Subclass Accession number: 5585
Subclass: 3.39.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 52539 (>50 %)  52540 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 5.6 +/- 7.6
Average RMSD (Å) : 0.900 +/- 0.265

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: pXXXXhh
(φψ)-conformation: aaglpbb
Pattern: [AEG][IL][AFL][EKN][EQS][KLT][GQ][DGS]x[PVY][ILV][FTV]
Conservation:-0.6361.828-0.7670.5340.534-1.0270.8960.014-1.027-1.0271.314-0.636
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gvn_B_471gvn   B5263AIFEETQGNVIVHHHHHTTT--EEaaaaaalvxbbx
1ky3_A_1391ky3   A144155ELAKSLGDIPLFHHHHHTTS--EEaaaaaaglxpbb
1qor_A_2511qor   A251262GILNQKGSLYVTHHHHHTTS-EEEaaaaaaglxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ky3_A_1391ky3   A     GDPGUANOSINE-5'-DIPHOSPHATE T - 157
1qor_A_2511qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 254

Clusters included in this Subclass
CLUSTER: HE.4.289