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Information on SUBCLASS 4.1.8
Subclass Accession number: 5594
Subclass: 4.1.8 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.1 (>75 %)  1.1.1 (>75 %)  1.1.1.37 (>75 %)  
GO : GO:0004457 (>75 %)  GO:0004459 (>75 %)  GO:0016614 (>75 %)  GO:0016615 (>75 %)  GO:0016616 (>75 %)  GO:0030060 (>75 %)  
SCOP : 51734 (>75 %)  51735 (>75 %)  51848 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 28.2 +/- 28.7
Average RMSD (Å) : 0.625 +/- 0.126

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXXXphXh
(φψ)-conformation: aabaapbb
Pattern: [IT][DGPS]x[AI][AMV][EKP][HLV]x[KP][EN][AP][ITV][IY]
Conservation:0.017-1.173-1.5740.167-0.3010.178-1.309-0.4761.3181.9480.4640.2390.500
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gv0_A_921gv0   A102114TGRIMEHSKNPIIHHHHTTT-SS-EEaaaaaaabaaxbx
1gv1_A_871gv1   A102114TDNIMKHSKNPIIHHHHTTT-SS-EEaaaaaaabaaxbb
1kyh_A_671kyh   A6779IPLIVPVLPEATYHHHHTTT-TT-EEaaaaaaabaaxbb
1ur5_A_901ur5   A103115ISQAAPLSPNAVIHHHHGGG-TT-EEaaaaaaabaaxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gv0_A_921gv0   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 94
1gv0_A_921gv0   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 97
1gv0_A_921gv0   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE E - 100
1gv0_A_921gv0   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 101
1gv0_A_921gv0   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 116
1kyh_A_671kyh   A     MSESELENOMETHIONINE L - 74
1kyh_A_671kyh   A     MSESELENOMETHIONINE E - 76
1kyh_A_671kyh   A     MSESELENOMETHIONINE A - 77
1kyh_A_671kyh   A     MSESELENOMETHIONINE T - 78
1ur5_A_901ur5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 95
1ur5_A_901ur5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 98
1ur5_A_901ur5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 101
1ur5_A_901ur5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE C - 102
1ur5_A_901ur5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Q - 105
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gv0_A_921gv0   A NAANAD BINDING SITE FOR CHAIN AN - 94
1gv0_A_921gv0   A NAANAD BINDING SITE FOR CHAIN AI - 97
1gv0_A_921gv0   A NAANAD BINDING SITE FOR CHAIN AE - 100

Clusters included in this Subclass
CLUSTER: HE.7.66