Information on SUBCLASS 4.3.7 |
Subclass Accession number: 5610
Subclass: 4.3.7 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005489 (>75 %) SCOP : 52832 (>75 %) 52833 (>75 %) 52834 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 27.8 +/- 21.7 Average RMSD (Å) : 0.600 +/- 0.115 Consensus geometry
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Consensus Sequence: | XpXXpPVh |
(φψ)-conformation: | aapabpbb |
Pattern: | x | [AEQS] | [EFHQ] | [ALV] | [IKL] | [EKQT] | [AGS] | [DEP] | x | [P] | [V] | [ILM] | [LV] | x | x |
Conservation: | -1.239 | -0.436 | -0.655 | -0.298 | -0.580 | -0.363 | -0.088 | 0.045 | -0.443 | 2.924 | 1.171 | 0.377 | 0.418 | -0.914 | 0.080 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ebf_A_73 | 1ebf | A | 77 | 91 | IAHLKTSPKPVILVD | HHHHTT-SS-EEEEE | aaaaaapabpbbxbx |
1fb6_A_17 | 1fb6 | A | 18 | 32 | KEFVLESEVPVMVDF | HHHTTT-SS-EEEEE | aaaaaaxabpbbbbx |
1nw2_A_10 | 1nw2 | A | 10 | 24 | FQQAIQGDKPVLVDF | HHHHTTSSS-EEEEE | aaaaaaxabpbbbxx |
1thx_*_12 | 1thx | - | 13 | 27 | ESEVLKAEQPVLVYF | HHHTTT-SS-EEEEE | aaaaaaxabxbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ebf_A_73 | 1ebf | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | D - 91 |
Clusters included in this Subclass |
CLUSTER: HE.7.87 |