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Information on SUBCLASS 4.8.6
Subclass Accession number: 5637
Subclass: 4.8.6 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 14.3 +/- 0.0
Average RMSD (Å) : 0.700 +/- 0.000

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hhXXPXcX
(φψ)-conformation: aabppabb
Pattern: [AL][NQ][AK][AY][F][LV][AL][NV][AK][P][AT][GK][IT][LV]
Conservation:-0.6030.112-0.460-0.4601.973-0.031-0.603-0.890-0.4602.546-0.174-0.460-0.460-0.031
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1o7q_A_3161o7q   A320333LNKYFLLNKPTKILHHHHHHHS--SEEEaaaaaaabxxabbx
1row_A_881row   A88101AQAAFVAVAPAGTVHHHHHTT----EEEaaaaaaabxpabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o7q_A_3161o7q   A     UDPURIDINE-5'-DIPHOSPHATE D - 316
1o7q_A_3161o7q   A     GALD-GALACTOSE E - 317
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o7q_A_3161o7q   A AC4GAL BINDING SITE FOR CHAIN AE - 317

Clusters included in this Subclass
CLUSTER: HE.5.311