Information on SUBCLASS 4.8.6 |
Subclass Accession number: 5637
Subclass: 4.8.6 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 14.3 +/- 0.0 Average RMSD (Å) : 0.700 +/- 0.000 Consensus geometry
|
Consensus Sequence: | hhXXPXcX |
(φψ)-conformation: | aabppabb |
Pattern: | [AL] | [NQ] | [AK] | [AY] | [F] | [LV] | [AL] | [NV] | [AK] | [P] | [AT] | [GK] | [IT] | [LV] |
Conservation: | -0.603 | 0.112 | -0.460 | -0.460 | 1.973 | -0.031 | -0.603 | -0.890 | -0.460 | 2.546 | -0.174 | -0.460 | -0.460 | -0.031 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1o7q_A_316 | 1o7q | A | 320 | 333 | LNKYFLLNKPTKIL | HHHHHHHS--SEEE | aaaaaaabxxabbx |
1row_A_88 | 1row | A | 88 | 101 | AQAAFVAVAPAGTV | HHHHHTT----EEE | aaaaaaabxpabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1o7q_A_316 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | D - 316 |
1o7q_A_316 | 1o7q | A | GALD-GALACTOSE | E - 317 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o7q_A_316 | 1o7q | A | AC4GAL BINDING SITE FOR CHAIN A | E - 317 |
Clusters included in this Subclass |
CLUSTER: HE.5.311 |