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Information on SUBCLASS 4.9.5
Subclass Accession number: 5642
Subclass: 4.9.5 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.8 (>75 %)  2.8.4 (>75 %)  2.8.4.1
GO : GO:0016782 (>75 %)  GO:0050497 (>75 %)  GO:0050524 (>75 %)  
SCOP : 54861 (>75 %)  55088 (>75 %)  55089 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 20.6 +/- 21.9
Average RMSD (Å) : 0.650 +/- 0.208

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XXhXGhXh
(φψ)-conformation: aabplpbb
Pattern: xx[STV]x[AFLT][AIY][AKL]x[ANR][FLY][PR][G][AFV][DKP][AIPT][GL][AT]
Conservation:-0.871-0.3630.010-0.916-0.560-0.314-0.311-0.618-0.2330.5540.5503.393-0.1010.172-0.605-0.5160.728
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e6y_C_30991e6y   C31013117FRSYFAAINFRGVDPGTHHHHHHHHHSSS-EEEEaaaaaaaaabxvbbxbb
1h7w_A_7711h7w   A776792RAVTTIARALPGFPILAHHHHHHHHHSTT--EEEaaaaaaaaabpvxpbbx
1hbn_C_981hbn   C100116VRSRAYLCRYRGADAGTHHHHHHHHH-SS-EEEEaaaaaaaaabxvbbbbb
1nm2_A_2801nm2   A280296TLTGLAKRALPGVKTLAHHHHHHHHHSTT-EEEEaaaaaaaaabxvxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e6y_C_30991e6y   C     GL3THIOGLYCIN T - 3117
1h7w_A_7711h7w   A     FMNFLAVIN MONONUCLEOTIDE T - 793
1hbn_C_981hbn   C     GOLGLYCEROL R - 108
1hbn_C_981hbn   C     GOLGLYCEROL Y - 109
1hbn_C_981hbn   C     GOLGLYCEROL R - 110
1hbn_C_981hbn   C     GOLGLYCEROL G - 111
1hbn_C_981hbn   C     GL3THIOGLYCIN T - 116
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h7w_A_7711h7w   A AC5FMN BINDING SITE FOR CHAIN AT - 793

Clusters included in this Subclass
CLUSTER: HE.4.253