Information on SUBCLASS 2.7.1 |
Subclass Accession number: 565
Subclass: 2.7.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 11.4 +/- 16.1 Average RMSD (Å) : 0.400 +/- 0.136 Consensus geometry
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Consensus Sequence: | XXXpXh |
(φψ)-conformation: | bbGabb |
Pattern: | [gklv] | [dehnqrsw] | [adgknrt] | [degknqs] | [cdehkqrsy] | [ilvy] |
Conservation: | -0.274 | -0.560 | -0.699 | 0.921 | -0.936 | 1.549 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a6q_*_182 | 1a6q | - | 182 | 187 | VMIQRV | EETTEE | bbGabx |
1daa_A_2 | 1daa | A | 4 | 9 | LWNDQI | EETTEE | xbGabb |
1egz_A_5 | 1egz | A | 7 | 12 | VNGNKI | EETTEE | bbGabb |
1f1b_B_124 | 1f1b | B | 129 | 134 | KRANDI | EETTEE | xxGaxb |
1f42_A_186 | 1f42 | A | 193 | 198 | VHKLKY | EETTEE | bbGaxb |
1ih7_A_617 | 1ih7 | A | 620 | 625 | GDTDSI | EETTEE | bbGabb |
1lvl_*_234 | 1lvl | - | 238 | 243 | YENGCL | EETTEE | bxGabb |
1oac_A_151 | 1oac | A | 157 | 162 | LDGKHI | EETTEE | bbGaxx |
1qdl_A_208 | 1qdl | A | 213 | 218 | KFDEKY | EETTEE | bbGabb |
1r0v_A_149 | 1r0v | A | 153 | 158 | LSDEYV | EETTEE | xbGabb |
1rl6_A_41 | 1rl6 | A | 44 | 49 | VEGNVI | EETTEE | xxGabx |
1umd_A_206 | 1umd | A | 206 | 211 | YAISVD | EETTEE | bbGaxx |
1uyp_A_344 | 1uyp | A | 349 | 354 | KSRDEL | EETTEE | bbGabx |
1wdn_A_18 | 1wdn | A | 19 | 24 | KQGDLY | EETTEE | xbGaxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a6q_*_182 | 1a6q | * | PO4PHOSPHATE ION | R - 186 |
1f1b_B_124 | 1f1b | B | ZNZINC ION | F - 125 |
1f1b_B_124 | 1f1b | B | ZNZINC ION | C - 138 |
1f42_A_186 | 1f42 | A | NAGN-ACETYL-D-GLUCOSAMINE | M - 189 |
1f42_A_186 | 1f42 | A | NAGN-ACETYL-D-GLUCOSAMINE | D - 191 |
1f42_A_186 | 1f42 | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 198 |
1f42_A_186 | 1f42 | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 199 |
1f42_A_186 | 1f42 | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 200 |
1lvl_*_234 | 1lvl | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | S - 234 |
1lvl_*_234 | 1lvl | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 235 |
1umd_A_206 | 1umd | A | MGMAGNESIUM ION | Y - 206 |
1umd_A_206 | 1umd | A | TDPTHIAMIN DIPHOSPHATE | Y - 206 |
1umd_A_206 | 1umd | A | MGMAGNESIUM ION | A - 207 |
1umd_A_206 | 1umd | A | TDPTHIAMIN DIPHOSPHATE | A - 207 |
1umd_A_206 | 1umd | A | MGMAGNESIUM ION | I - 208 |
1umd_A_206 | 1umd | A | TDPTHIAMIN DIPHOSPHATE | I - 208 |
1umd_A_206 | 1umd | A | COI2-OXO-4-METHYLPENTANOIC ACID | I - 208 |
Clusters included in this Subclass |
CLUSTER: HA.1.17 |