Information on SUBCLASS 4.11.5 |
Subclass Accession number: 5651
Subclass: 4.11.5 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 7.8 +/- 8.8 Average RMSD (Å) : 1.067 +/- 0.208 Consensus geometry
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Consensus Sequence: | hXXXpXXX |
(φψ)-conformation: | aapaapbb |
Pattern: | [QS] | [AKQ] | [AEQ] | [AEF] | x | [DEK] | x | [AM] | [AEM] | x | [EP] | [DER] | x | x | x | [FV] | [AGM] |
Conservation: | 1.220 | 0.166 | 0.404 | -0.906 | -0.787 | 1.118 | -0.430 | 0.758 | -0.549 | -0.787 | 2.132 | 0.642 | -1.144 | -1.382 | -0.906 | 0.878 | -0.430 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1lqt_A_64 | 1lqt | A | 64 | 80 | SKQFEKTAEDPRFRFFG | HHHHHHHHTSTTEEEEE | Naaaaaaaaxaabbbbx |
1n71_A_33 | 1n71 | A | 33 | 49 | SAEEVEEMMNPERIAVA | HHHHHHHHT-TTSEEEE | aaaaaaaaapaaxbbbb |
1ono_A_82 | 1ono | A | 82 | 98 | QQAACDMAALEDVDQVM | HHHHHHHHS-TT--EEE | aaaaaaaaapaaxabbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lqt_A_64 | 1lqt | A | ACTACETATE ION | F - 67 |
1lqt_A_64 | 1lqt | A | ACTACETATE ION | E - 68 |
1lqt_A_64 | 1lqt | A | ACTACETATE ION | A - 71 |
1lqt_A_64 | 1lqt | A | ACTACETATE ION | F - 76 |
1lqt_A_64 | 1lqt | A | ACTACETATE ION | R - 77 |
1lqt_A_64 | 1lqt | A | ACTACETATE ION | F - 78 |
Clusters included in this Subclass |
CLUSTER: HE.5.370 |