Logo
Information on SUBCLASS 4.14.1
Subclass Accession number: 5656
Subclass: 4.14.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 25.0 +/- 21.0
Average RMSD (Å) : 0.650 +/- 0.363

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XhGXpGph
(φψ)-conformation: aaeaapbb
Pattern: x[acit][akqs]x[AFLMV]x[DQRT]x[ILV][G]x[AEKNST][AG]x[IV][FITV][AGPSV]
Conservation:-0.880-0.400-0.353-0.871-0.085-0.580-0.183-0.6680.9292.593-1.061-0.2781.573-0.6221.2240.108-0.445
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dl5_A_881dl5   A89105NAAVMSRVVGEKGLVVSHHHHHHHHH-TT-EEEEaaaaaaaaaeaaxbbbb
1ej0_A_641ej0   A6581WSQYVVTQIGGKGRIIAHHHHHHHHH-TT-EEEEaaaaaaaaaeaaxbbbb
1g8a_A_871g8a   A87103TASHVSDIVGWEGKIFGHHHHHHHHH-TTSEEEEaaaaaaaaaeaabbbbx
1i1n_A_901i1n   A91107LTACFARMVGCTGKVIGHHHHHHHHH-TT-EEEEaaaaaaaaaeaaxbbbb
1i9g_A_1121i9g   A113129LTLSLLRAVGPAGQVISHHHHHHHHH-TTSEEEEaaaaaaaaaeaabbbbb
1id1_A_391id1   A4157DIKQLEQRLGDNADVIPHHHHHHHHH-TT-EEEEaaaaaaaaaeaaxbxxx
1kp8_A_1561kp8   A161177LIAEAMDKVGKEGVITVHHHHHHHHH-TTSEEEEaaaaaaaaaeaaxxbbb
1o54_A_1131o54   A114130MCAVLARAVGSSGKVFAHHHHHHHHTTTT-EEEEaaaaaaaaaeaaxbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dl5_A_881dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 88
1dl5_A_881dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE N - 89
1dl5_A_881dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE A - 90
1dl5_A_881dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 105
1dl5_A_881dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 106
1dl5_A_881dl5   A     SAHS-ADENOSYL-L-HOMOCYSTEINE E - 107
1ej0_A_641ej0   A     SAMS-ADENOSYLMETHIONINE G - 64
1ej0_A_641ej0   A     SAMS-ADENOSYLMETHIONINE W - 65
1ej0_A_641ej0   A     SAMS-ADENOSYLMETHIONINE S - 66
1ej0_A_641ej0   A     HGMERCURY (II) ION A - 81
1ej0_A_641ej0   A     HGMERCURY (II) ION C - 82
1ej0_A_641ej0   A     SAMS-ADENOSYLMETHIONINE C - 82
1ej0_A_641ej0   A     HGMERCURY (II) ION D - 83
1ej0_A_641ej0   A     SAMS-ADENOSYLMETHIONINE D - 83
1i1n_A_901i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 90
1i1n_A_901i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 91
1i1n_A_901i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 108
1i1n_A_901i1n   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 109
1i9g_A_1121i9g   A     SAMS-ADENOSYLMETHIONINE A - 112
1i9g_A_1121i9g   A     SAMS-ADENOSYLMETHIONINE L - 113
1i9g_A_1121i9g   A     SAMS-ADENOSYLMETHIONINE T - 114
1i9g_A_1121i9g   A     SAMS-ADENOSYLMETHIONINE Y - 130

Clusters included in this Subclass
CLUSTER: HE.4.108