Information on SUBCLASS 4.21.1 |
Subclass Accession number: 5666
Subclass: 4.21.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 15.0 +/- 28.6 Average RMSD (Å) : 0.780 +/- 0.204 Consensus geometry
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Consensus Sequence: | pXXXXXhX |
(φψ)-conformation: | aalbbabb |
Pattern: | x | [dkqry] | x | x | [ehkr] | [ait] | x | x | [kps] | [DEGPST] | [FHLWY] | [aitv] |
Conservation: | -0.467 | -1.174 | -0.829 | -0.797 | 0.635 | 0.612 | -1.152 | -0.176 | 1.321 | 0.103 | 2.043 | -0.121 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a1h_A_119 | 1a1h | A | 125 | 136 | HIRIHTGQKPFQ | HHHHHH----EE | aaaaaavxbabb |
1fs7_A_248 | 1fs7 | A | 253 | 264 | AYYDEINFADWT | HHHHHTT--SEE | aaaaaalxbabx |
1gu6_A_235 | 1gu6 | A | 240 | 251 | QYYDKIAFSDWT | HHHHHTT--SEE | aaaaaalxbabb |
1j9q_A_203 | 1j9q | A | 207 | 218 | VKVMRTLTPTHV | HHHHTTT--SEE | aaaaaalbxabb |
1kbv_A_190 | 1kbv | A | 190 | 201 | MDKAVAEQPEYV | HHHHHHT--SEE | aaaaaavbxabb |
1llm_C_116 | 1llm | C | 122 | 133 | HIRTHTGEKPFA | HHHHHH----EE | aaaaaavxbabx |
1nif_*_199 | 1nif | - | 207 | 218 | VKAMRTLTPTHI | HHHHTT---SEE | aaaaaavbxabb |
1oe1_A_197 | 1oe1 | A | 201 | 212 | VQVMRTLTPSHI | HHHHHTT--SEE | aaaaaavbxabb |
1p2f_A_104 | 1p2f | A | 112 | 123 | KRFLEREKKGLY | HHHHHH---SEE | aaaaaalbbabb |
1qdb_A_253 | 1qdb | A | 258 | 269 | KYYDEINFSDWT | HHHHHTT--SEE | aaaaaalbbabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a1h_A_119 | 1a1h | A | ZNZINC ION | H - 125 |
1a1h_A_119 | 1a1h | A | ZNZINC ION | I - 126 |
1a1h_A_119 | 1a1h | A | ZNZINC ION | H - 129 |
1fs7_A_248 | 1fs7 | A | CACALCIUM ION | Y - 255 |
1fs7_A_248 | 1fs7 | A | CACALCIUM ION | D - 262 |
1gu6_A_235 | 1gu6 | A | GOLGLYCEROL | V - 235 |
1gu6_A_235 | 1gu6 | A | GOLGLYCEROL | E - 236 |
1gu6_A_235 | 1gu6 | A | GOLGLYCEROL | M - 238 |
1gu6_A_235 | 1gu6 | A | CACALCIUM ION | Y - 242 |
1gu6_A_235 | 1gu6 | A | CACALCIUM ION | D - 249 |
1llm_C_116 | 1llm | C | ZNZINC ION | L - 119 |
1llm_C_116 | 1llm | C | ZNZINC ION | H - 122 |
1llm_C_116 | 1llm | C | ZNZINC ION | I - 123 |
1llm_C_116 | 1llm | C | ZNZINC ION | T - 125 |
1llm_C_116 | 1llm | C | ZNZINC ION | H - 126 |
1qdb_A_253 | 1qdb | A | CACALCIUM ION | Y - 260 |
1qdb_A_253 | 1qdb | A | CACALCIUM ION | D - 267 |
Clusters included in this Subclass |
CLUSTER: HE.3.136 |
CLUSTER: HE.4.153 |
CLUSTER: HE.5.114 |