Information on SUBCLASS 4.22.1 |
Subclass Accession number: 5668
Subclass: 4.22.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 25.3 +/- 29.1 Average RMSD (Å) : 0.620 +/- 0.148 Consensus geometry
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Consensus Sequence: | XXpXGhXX |
(φψ)-conformation: | aabpgpbb |
Pattern: | x | x | [GKM] | x | x | [ACKV] | x | [ery] | [PS] | [G] | [ILV] | [ckl] | [ITV] | [nqy] | [CGNS] |
Conservation: | -0.534 | -0.500 | -0.339 | -0.248 | 0.085 | -0.528 | -0.858 | -0.813 | 1.351 | 2.785 | 0.838 | -0.787 | 0.472 | -0.624 | -0.300 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eex_A_179 | 1eex | A | 187 | 201 | LVGSQVGRPGVLTQC | HHHHHHH-TT-EEEE | aaaaaaabpgpxbbb |
1ei9_A_52 | 1ei9 | A | 55 | 69 | KKMVEKKIPGIHVLS | HHHHHHHSTT--EEE | aaaaaaabpvpbbbx |
1iwp_A_180 | 1iwp | A | 188 | 202 | LVGSQCGRPGVLTQC | HHHHHHHSTT-EEEE | aaaaaaabpgxxbbb |
1jqe_A_65 | 1jqe | A | 71 | 85 | LSKVQAQYPGVCINN | HHHHHHHSTT-EEEE | aaaaaaabpvxxbbb |
1qh5_A_63 | 1qh5 | A | 63 | 77 | NEKLVKLESGLKVYG | HHHHHHHSTT-EEEE | aaaaaaabxvxbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eex_A_179 | 1eex | A | PGO1,2-PROPANEDIOL | Q - 200 |
1iwp_A_180 | 1iwp | A | PGO1,2-PROPANEDIOL | Q - 201 |
1jqe_A_65 | 1jqe | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | E - 65 |
1jqe_A_65 | 1jqe | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | I - 66 |
1jqe_A_65 | 1jqe | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 67 |
1jqe_A_65 | 1jqe | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 88 |
Clusters included in this Subclass |
CLUSTER: HE.3.232 |
CLUSTER: HE.4.261 |