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Information on SUBCLASS 4.23.1
Subclass Accession number: 5669
Subclass: 4.23.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 25.0 +/- 28.4
Average RMSD (Å) : 0.913 +/- 0.348

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XhcGphXX
(φψ)-conformation: aallapbb
Pattern: x[agklt][afgltv]xx[dekr]xxx[dgns][gn]x[apq]xxxxx
Conservation:-0.715-0.690-0.695-0.6640.2491.003-0.705-0.309-0.0251.0193.184-0.3220.679-0.2800.266-0.424-1.031-0.540
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d0n_A_4731d0n   A482499LTAQLDEELGGTPVQSRVHHHHHHHTTTS-SEEEEEaaaaaaaaagvaxxbbbb
1d0n_A_951d0n   A104121FTVQLDDYLNGRAVQHREHHHHHHHHTTS--EEEEEaaaaaaaaavlaxxbbbb
1j72_A_711j72   A8097LAVQLDDYLGGRPVQHREHHHHHHHHTTT-SEEEEEaaaaaaaaalvaxxbbbx
1j93_A_1271j93   A132149ALTILRKEVNNQAAVLGFHHHHHHHHHTTSSEEEEEaaaaaaaaallabbxbxb
1kcq_A_2071kcq   A217234SKGIRDNERSGRARVHVSHHHHHHHTSTT-SEEEEEaaaaaaaaalvabbxbxb
1m5h_A_1171m5h   A117134TGFKLKFFADGYQKEVEVHHHHHGGGGTT--EEEEEaaaaaaaaalgapbxbbb
1p8x_A_4731p8x   A482499LTAQLDEELGGTPVQSRVHHHHHHHHTTT-SEEEEEaaaaaaaaavvaxxbbbb
1qlm_A_461qlm   A4966GLLFSEVCMGGLATVELTHHHHHHHHTTT-EEEEEEaaaaaaaaavvabbbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kcq_A_2071kcq   A     CDCADMIUM ION E - 209
1kcq_A_2071kcq   A     CDCADMIUM ION R - 230
1kcq_A_2071kcq   A     CDCADMIUM ION V - 231
1kcq_A_2071kcq   A     CDCADMIUM ION H - 232
1kcq_A_2071kcq   A     CDCADMIUM ION V - 233
1p8x_A_4731p8x   A     CACALCIUM ION E - 475
1qlm_A_461qlm   A     PO4PHOSPHATE ION L - 60

Clusters included in this Subclass
CLUSTER: HE.4.165
CLUSTER: HE.6.180
CLUSTER: HE.7.159