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Information on SUBCLASS 4.26.1
Subclass Accession number: 5674
Subclass: 4.26.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 18.5 +/- 17.4
Average RMSD (Å) : 1.100 +/- 0.324

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: phGcXXhX
(φψ)-conformation: aaeappbb
Pattern: x[ADEKR][aekqr][iltv][acgklv][AEKRS][aeqrs][AILVY][GQ][DEGKNT]xx[fvw]x
Conservation:-0.5430.0640.0870.435-1.1030.229-0.2260.5272.9890.202-0.885-0.758-0.347-0.673
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e6y_A_12041e6y   A12071220AAQIKASIGKTSWQHHHHHHHH-S-EEEaaaaaaaaeabbbb
1ehi_A_1661ehi   A166179WDKIVAELGNIVFVHHHHHHHH-S-EEEaaaaaaaaeabbbb
1ej0_A_1031ej0   A106119MKALLERVGDSKVQHHHHHHHHTT--EEaaaaaaaaeaxxba
1gpm_A_2101gpm   A218231VARIREQVGDDKVIHHHHHHHHTT-EEEaaaaaaaaeaxxbb
1hdr_*_591hdr   -6780TAEVGKLLGEEKVDHHHHHHHHTT--EEaaaaaaaaeaxxba
1li5_A_2071li5   A210223SAMNCKQLGNHFDIHHHHHHHH-SSEEEaaaaaaaaeabbab
1mna_A_1221mna   A130143ARAILRAAGDAPVVHHHHHHHHTTS-EEaaaaaaaaeaxxbb
1ooe_A_531ooe   A6174LEQTASSLQGSQVDHHHHHHHHTT--EEaaaaaaaaeaxbba
1xgs_A_2171xgs   A223236LAKIKREYGTLPFAHHHHHHHTTTS-EEaaaaaaaaeaxpbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ehi_A_1661ehi   A     ADPADENOSINE-5'-DIPHOSPHATE F - 178
1ehi_A_1661ehi   A     ADPADENOSINE-5'-DIPHOSPHATE K - 180
1ej0_A_1031ej0   A     HGMERCURY (II) ION V - 105
1ej0_A_1031ej0   A     HGMERCURY (II) ION L - 109
1gpm_A_2101gpm   A     AMPADENOSINE MONOPHOSPHATE L - 232
1gpm_A_2101gpm   A     POPPYROPHOSPHATE 2- G - 233
1gpm_A_2101gpm   A     AMPADENOSINE MONOPHOSPHATE G - 233
1hdr_*_591hdr   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Q - 62
1hdr_*_591hdr   *     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE C - 84
1li5_A_2071li5   A     ZNZINC ION E - 208
1li5_A_2071li5   A     ZNZINC ION C - 209
1li5_A_2071li5   A     ZNZINC ION H - 224

Clusters included in this Subclass
CLUSTER: HE.4.110