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Information on SUBCLASS 4.27.1
Subclass Accession number: 5676
Subclass: 4.27.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 12.5 +/- 14.0
Average RMSD (Å) : 0.550 +/- 0.129

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: hhXchpXh
(φψ)-conformation: aaplpabb
Pattern: x[FGP]x[FLMY]x[GNQ]x[DEQ]x[AILV][ILV]x
Conservation:-0.517-0.751-1.2590.581-1.0050.503-0.4141.684-1.0050.3281.6820.172
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1byu_A_771byu   A7788DGYYIQAQCAIIHHHHTT-SEEEEaaaapvxabbbb
1cfz_A_491cfz   A4960LGDMANRDHLIIHHHHSS-SEEEEaaaaxlbabbbb
1fp2_A_1831fp2   A183194DFVFDGLESIVDHHHHTT-SEEEEaaaapvxabbbx
2cmd_*_642cmd   -6475TPALEGADVVLIHHHHTT-SEEEEaaaapvxabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cfz_A_491cfz   A     CDCADMIUM ION D - 62
1cfz_A_491cfz   A     CDCADMIUM ION A - 63
1fp2_A_1831fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 194
1fp2_A_1831fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 195
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1cfz_A_491cfz   A CDBMETAL ION WAS MODELED AS A CADMIUM (FROM THE CRYSTALLIZATION BUFFER) IN VIVO: PERHAPS NICKEL.D - 62

Clusters included in this Subclass
CLUSTER: HE.3.178