Information on SUBCLASS 4.27.1 |
Subclass Accession number: 5676
Subclass: 4.27.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 12.5 +/- 14.0 Average RMSD (Å) : 0.550 +/- 0.129 Consensus geometry
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Consensus Sequence: | hhXchpXh |
(φψ)-conformation: | aaplpabb |
Pattern: | x | [FGP] | x | [FLMY] | x | [GNQ] | x | [DEQ] | x | [AILV] | [ILV] | x |
Conservation: | -0.517 | -0.751 | -1.259 | 0.581 | -1.005 | 0.503 | -0.414 | 1.684 | -1.005 | 0.328 | 1.682 | 0.172 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1byu_A_77 | 1byu | A | 77 | 88 | DGYYIQAQCAII | HHHHTT-SEEEE | aaaapvxabbbb |
1cfz_A_49 | 1cfz | A | 49 | 60 | LGDMANRDHLII | HHHHSS-SEEEE | aaaaxlbabbbb |
1fp2_A_183 | 1fp2 | A | 183 | 194 | DFVFDGLESIVD | HHHHTT-SEEEE | aaaapvxabbbx |
2cmd_*_64 | 2cmd | - | 64 | 75 | TPALEGADVVLI | HHHHTT-SEEEE | aaaapvxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cfz_A_49 | 1cfz | A | CDCADMIUM ION | D - 62 |
1cfz_A_49 | 1cfz | A | CDCADMIUM ION | A - 63 |
1fp2_A_183 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 194 |
1fp2_A_183 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 195 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1cfz_A_49 | 1cfz | A | CDBMETAL ION WAS MODELED AS A CADMIUM (FROM THE CRYSTALLIZATION BUFFER) IN VIVO: PERHAPS NICKEL. | D - 62 |
Clusters included in this Subclass |
CLUSTER: HE.3.178 |