Information on SUBCLASS 4.29.1 |
Subclass Accession number: 5678
Subclass: 4.29.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 21.8 +/- 26.8 Average RMSD (Å) : 0.456 +/- 0.270 Consensus geometry
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Consensus Sequence: | XXXphXXh |
(φψ)-conformation: | aappbabb |
Pattern: | [aegqrt] | [ailpv] | [asv] | [aeqrs] | x | [KLT] | [denq] | [AGSV] | [DEGT] | [adt] | [cilvy] | [hilwy] | [ILV] |
Conservation: | -0.903 | -0.541 | -0.516 | -0.287 | -1.081 | 0.696 | 0.454 | 0.322 | 0.560 | -0.582 | -0.443 | -0.427 | 2.748 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4s_A_437 | 1a4s | A | 442 | 454 | RVAANLEAGTCYI | HHHHHS-SSEEEE | aaaaaxxbabbxb |
1bxs_A_436 | 1bxs | A | 441 | 453 | TVSSALQSGTVWV | HHHHHS--SEEEE | aaaaaxxbabbxb |
1chm_A_86 | 1chm | A | 86 | 98 | QPWRRTVGTDNIV | HHHHH--SSEEEE | aaaaaxxbabbbb |
1euh_A_414 | 1euh | A | 419 | 431 | GIAEQLEVGTVHI | HHHHHS-SSEEEE | aaaaaxxbabbbx |
1ii7_A_315 | 1ii7 | A | 316 | 328 | EIKELLNVEYLKI | HHHHH---SEEEE | aaaaaxxbabbbb |
1ky8_A_432 | 1ky8 | A | 437 | 449 | RAVRLLEVGAIYI | HHHHH--SSEEEE | aaaaaxxbabbbx |
1o04_A_436 | 1o04 | A | 441 | 453 | YLSQALQAGTVWV | HHHHH--SSEEEE | aaaaaxxbabbxb |
1o9j_A_436 | 1o9j | A | 441 | 453 | TVSSALQAGTVWV | HHHHHS-SSEEEE | aaaaaxxbabbbb |
1r0w_A_550 | 1r0w | A | 559 | 571 | ARAVYKDADLYLL | HHHHHS--SEEEE | aaaaapxbabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | A - 439 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | N - 440 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | Y - 441 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | L - 442 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | S - 443 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | Q - 444 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | A - 445 |
1o04_A_436 | 1o04 | A | GAIGUANIDINE | Q - 447 |
Clusters included in this Subclass |
CLUSTER: HE.3.87 |