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Information on SUBCLASS 4.29.1
Subclass Accession number: 5678
Subclass: 4.29.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 21.8 +/- 26.8
Average RMSD (Å) : 0.456 +/- 0.270

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXXphXXh
(φψ)-conformation: aappbabb
Pattern: [aegqrt][ailpv][asv][aeqrs]x[KLT][denq][AGSV][DEGT][adt][cilvy][hilwy][ILV]
Conservation:-0.903-0.541-0.516-0.287-1.0810.6960.4540.3220.560-0.582-0.443-0.4272.748
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4s_A_4371a4s   A442454RVAANLEAGTCYIHHHHHS-SSEEEEaaaaaxxbabbxb
1bxs_A_4361bxs   A441453TVSSALQSGTVWVHHHHHS--SEEEEaaaaaxxbabbxb
1chm_A_861chm   A8698QPWRRTVGTDNIVHHHHH--SSEEEEaaaaaxxbabbbb
1euh_A_4141euh   A419431GIAEQLEVGTVHIHHHHHS-SSEEEEaaaaaxxbabbbx
1ii7_A_3151ii7   A316328EIKELLNVEYLKIHHHHH---SEEEEaaaaaxxbabbbb
1ky8_A_4321ky8   A437449RAVRLLEVGAIYIHHHHH--SSEEEEaaaaaxxbabbbx
1o04_A_4361o04   A441453YLSQALQAGTVWVHHHHH--SSEEEEaaaaaxxbabbxb
1o9j_A_4361o9j   A441453TVSSALQAGTVWVHHHHHS-SSEEEEaaaaaxxbabbbb
1r0w_A_5501r0w   A559571ARAVYKDADLYLLHHHHHS--SEEEEaaaaapxbabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL A - 439
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL N - 440
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL Y - 441
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL L - 442
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL S - 443
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL Q - 444
1o04_A_4361o04   A     EDO1,2-ETHANEDIOL A - 445
1o04_A_4361o04   A     GAIGUANIDINE Q - 447

Clusters included in this Subclass
CLUSTER: HE.3.87